Hb_136884_010

Information

Type -
Description -
Location Contig136884: 1-570
Sequence    

Annotation

kegg
ID rcu:RCOM_1331600
description Disease resistance protein RFL1, putative (EC:3.1.3.16)
nr
ID XP_002521789.1
description Disease resistance protein RFL1, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S720
description Disease resistance protein RFL1, putative OS=Ricinus communis GN=RCOM_1331600 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_136884_010 0.0 - - Disease resistance protein RFL1, putative [Ricinus communis]
2 Hb_183820_010 0.0892841232 - - Disease resistance protein RFL1, putative [Ricinus communis]
3 Hb_002289_110 0.1318641184 - - PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Jatropha curcas]
4 Hb_001976_120 0.135399882 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
5 Hb_008001_020 0.1393461253 transcription factor TF Family: GRAS PREDICTED: protein SHORT-ROOT-like [Populus euphratica]
6 Hb_012395_150 0.1395156177 transcription factor TF Family: Orphans PREDICTED: two-component response regulator-like APRR7 [Jatropha curcas]
7 Hb_000365_290 0.1452978365 - - PREDICTED: protein MTL1-like isoform X1 [Jatropha curcas]
8 Hb_006395_010 0.1469141019 - - hypothetical protein RCOM_0725500 [Ricinus communis]
9 Hb_001369_530 0.1476113287 - - 21 kDa protein precursor, putative [Ricinus communis]
10 Hb_001821_030 0.1509302192 - - hypothetical protein JCGZ_13357 [Jatropha curcas]
11 Hb_000586_100 0.1544461309 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002762_070 0.1560555056 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
13 Hb_006020_010 0.157623837 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
14 Hb_001998_260 0.1595414255 - - cytochrome P450, putative [Ricinus communis]
15 Hb_001006_030 0.1605682182 - - conserved hypothetical protein [Ricinus communis]
16 Hb_028008_030 0.1637296582 - - probable xyloglucan endotransglucosylase/hydrolase protein 23 precursor [Malus domestica]
17 Hb_002735_010 0.1639913966 - - PREDICTED: CLAVATA3/ESR (CLE)-related protein 44 [Prunus mume]
18 Hb_002461_070 0.1660469092 - - gibberellin 2-oxidase, putative [Ricinus communis]
19 Hb_028207_030 0.1671514801 - - PREDICTED: non-specific lipid-transfer protein 8-like [Citrus sinensis]
20 Hb_001157_130 0.1686534213 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]

Gene co-expression network

sample Hb_136884_010 Hb_136884_010 Hb_183820_010 Hb_183820_010 Hb_136884_010--Hb_183820_010 Hb_002289_110 Hb_002289_110 Hb_136884_010--Hb_002289_110 Hb_001976_120 Hb_001976_120 Hb_136884_010--Hb_001976_120 Hb_008001_020 Hb_008001_020 Hb_136884_010--Hb_008001_020 Hb_012395_150 Hb_012395_150 Hb_136884_010--Hb_012395_150 Hb_000365_290 Hb_000365_290 Hb_136884_010--Hb_000365_290 Hb_183820_010--Hb_012395_150 Hb_000002_230 Hb_000002_230 Hb_183820_010--Hb_000002_230 Hb_183820_010--Hb_000365_290 Hb_006020_010 Hb_006020_010 Hb_183820_010--Hb_006020_010 Hb_004590_010 Hb_004590_010 Hb_183820_010--Hb_004590_010 Hb_001799_090 Hb_001799_090 Hb_002289_110--Hb_001799_090 Hb_005237_070 Hb_005237_070 Hb_002289_110--Hb_005237_070 Hb_001856_160 Hb_001856_160 Hb_002289_110--Hb_001856_160 Hb_001998_260 Hb_001998_260 Hb_002289_110--Hb_001998_260 Hb_029866_080 Hb_029866_080 Hb_002289_110--Hb_029866_080 Hb_028008_030 Hb_028008_030 Hb_002289_110--Hb_028008_030 Hb_002110_210 Hb_002110_210 Hb_001976_120--Hb_002110_210 Hb_000504_050 Hb_000504_050 Hb_001976_120--Hb_000504_050 Hb_002735_010 Hb_002735_010 Hb_001976_120--Hb_002735_010 Hb_002053_090 Hb_002053_090 Hb_001976_120--Hb_002053_090 Hb_013691_040 Hb_013691_040 Hb_001976_120--Hb_013691_040 Hb_008001_020--Hb_028008_030 Hb_000586_100 Hb_000586_100 Hb_008001_020--Hb_000586_100 Hb_094637_010 Hb_094637_010 Hb_008001_020--Hb_094637_010 Hb_000286_030 Hb_000286_030 Hb_008001_020--Hb_000286_030 Hb_028207_030 Hb_028207_030 Hb_008001_020--Hb_028207_030 Hb_008001_020--Hb_001998_260 Hb_012395_150--Hb_004590_010 Hb_179118_010 Hb_179118_010 Hb_012395_150--Hb_179118_010 Hb_006395_010 Hb_006395_010 Hb_012395_150--Hb_006395_010 Hb_017661_020 Hb_017661_020 Hb_012395_150--Hb_017661_020 Hb_012879_010 Hb_012879_010 Hb_012395_150--Hb_012879_010 Hb_002762_070 Hb_002762_070 Hb_000365_290--Hb_002762_070 Hb_000365_290--Hb_006395_010 Hb_001283_010 Hb_001283_010 Hb_000365_290--Hb_001283_010 Hb_027445_080 Hb_027445_080 Hb_000365_290--Hb_027445_080 Hb_000365_290--Hb_028207_030 Hb_000077_460 Hb_000077_460 Hb_000365_290--Hb_000077_460
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.380965 7.80809 0.614125 10.6886 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.184448 8.38505 0.406921

CAGE analysis