Hb_114943_020

Information

Type -
Description -
Location Contig114943: 15218-21144
Sequence    

Annotation

kegg
ID tcc:TCM_039214
description P450 reductase 2
nr
ID XP_012074050.1
description PREDICTED: NADPH--cytochrome P450 reductase 2 [Jatropha curcas]
swissprot
ID Q05001
description NADPH--cytochrome P450 reductase OS=Catharanthus roseus GN=CPR PE=2 SV=1
trembl
ID A0A067KVU3
description NADPH--cytochrome P450 reductase OS=Jatropha curcas GN=JCGZ_08664 PE=3 SV=1
Gene Ontology
ID GO:0005789
description nadph--cytochrome p450 reductase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04504: 15221-21167 , PASA_asmbl_04505: 15221-21167 , PASA_asmbl_04507: 19818-20077
cDNA
(Sanger)
(ID:Location)		 037_F11.ab1: 15221-16098

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_114943_020 0.0 - - PREDICTED: NADPH--cytochrome P450 reductase 2 [Jatropha curcas]
2 Hb_000015_150 0.1120981222 - - Ubiquitin-conjugating enzyme E2 7 family protein [Populus trichocarpa]
3 Hb_000363_180 0.1135122872 - - PREDICTED: uncharacterized protein LOC105633052 [Jatropha curcas]
4 Hb_002411_160 0.1148806965 - - PREDICTED: uncharacterized protein LOC105631262 isoform X1 [Jatropha curcas]
5 Hb_002740_040 0.1253963791 - - hypothetical protein POPTR_0005s00350g [Populus trichocarpa]
6 Hb_000470_110 0.1255713313 - - PREDICTED: probable LIM domain-containing serine/threonine-protein kinase DDB_G0287001 [Jatropha curcas]
7 Hb_005833_030 0.1263092079 - - PREDICTED: uncharacterized membrane protein At1g16860 [Jatropha curcas]
8 Hb_002259_110 0.1266561909 - - PREDICTED: uncharacterized protein LOC105630166 [Jatropha curcas]
9 Hb_001001_090 0.1326639209 - - PREDICTED: uncharacterized protein LOC105633658 [Jatropha curcas]
10 Hb_000649_330 0.1339756626 - - hypothetical protein POPTR_0010s11880g [Populus trichocarpa]
11 Hb_000661_220 0.134820489 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 55-like [Jatropha curcas]
12 Hb_000631_090 0.1358965346 - - PREDICTED: uncharacterized protein LOC105640619 [Jatropha curcas]
13 Hb_004837_220 0.1376448219 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
14 Hb_080147_020 0.1384432844 - - 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
15 Hb_052135_020 0.1396864843 - - PREDICTED: MAP kinase kinase MKK1/SSP32-like [Jatropha curcas]
16 Hb_001133_090 0.1403991195 - - hypothetical protein POPTR_0012s02680g [Populus trichocarpa]
17 Hb_000732_230 0.140451681 - - PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like isoform X1 [Jatropha curcas]
18 Hb_001195_420 0.1455013566 - - PREDICTED: uncharacterized protein LOC105633774 isoform X4 [Jatropha curcas]
19 Hb_000692_210 0.1458443985 - - PREDICTED: 24-methylenesterol C-methyltransferase 2 [Jatropha curcas]
20 Hb_000950_040 0.1474834699 - - cation-transporting atpase plant, putative [Ricinus communis]

Gene co-expression network

sample Hb_114943_020 Hb_114943_020 Hb_000015_150 Hb_000015_150 Hb_114943_020--Hb_000015_150 Hb_000363_180 Hb_000363_180 Hb_114943_020--Hb_000363_180 Hb_002411_160 Hb_002411_160 Hb_114943_020--Hb_002411_160 Hb_002740_040 Hb_002740_040 Hb_114943_020--Hb_002740_040 Hb_000470_110 Hb_000470_110 Hb_114943_020--Hb_000470_110 Hb_005833_030 Hb_005833_030 Hb_114943_020--Hb_005833_030 Hb_001001_090 Hb_001001_090 Hb_000015_150--Hb_001001_090 Hb_000649_330 Hb_000649_330 Hb_000015_150--Hb_000649_330 Hb_002463_050 Hb_002463_050 Hb_000015_150--Hb_002463_050 Hb_000015_150--Hb_002411_160 Hb_027043_010 Hb_027043_010 Hb_000015_150--Hb_027043_010 Hb_000196_010 Hb_000196_010 Hb_000363_180--Hb_000196_010 Hb_009745_010 Hb_009745_010 Hb_000363_180--Hb_009745_010 Hb_000732_230 Hb_000732_230 Hb_000363_180--Hb_000732_230 Hb_000950_040 Hb_000950_040 Hb_000363_180--Hb_000950_040 Hb_001195_420 Hb_001195_420 Hb_000363_180--Hb_001195_420 Hb_001009_150 Hb_001009_150 Hb_000363_180--Hb_001009_150 Hb_086639_050 Hb_086639_050 Hb_002411_160--Hb_086639_050 Hb_080147_020 Hb_080147_020 Hb_002411_160--Hb_080147_020 Hb_002411_160--Hb_001001_090 Hb_002411_160--Hb_000649_330 Hb_000098_180 Hb_000098_180 Hb_002411_160--Hb_000098_180 Hb_002685_030 Hb_002685_030 Hb_002740_040--Hb_002685_030 Hb_087587_010 Hb_087587_010 Hb_002740_040--Hb_087587_010 Hb_014720_030 Hb_014720_030 Hb_002740_040--Hb_014720_030 Hb_002740_040--Hb_000470_110 Hb_002740_040--Hb_000950_040 Hb_002809_160 Hb_002809_160 Hb_000470_110--Hb_002809_160 Hb_004718_060 Hb_004718_060 Hb_000470_110--Hb_004718_060 Hb_001878_060 Hb_001878_060 Hb_000470_110--Hb_001878_060 Hb_011457_140 Hb_011457_140 Hb_000470_110--Hb_011457_140 Hb_000631_090 Hb_000631_090 Hb_000470_110--Hb_000631_090 Hb_054865_020 Hb_054865_020 Hb_000470_110--Hb_054865_020 Hb_002687_060 Hb_002687_060 Hb_005833_030--Hb_002687_060 Hb_000994_020 Hb_000994_020 Hb_005833_030--Hb_000994_020 Hb_000297_030 Hb_000297_030 Hb_005833_030--Hb_000297_030 Hb_000890_160 Hb_000890_160 Hb_005833_030--Hb_000890_160 Hb_000260_770 Hb_000260_770 Hb_005833_030--Hb_000260_770 Hb_152910_010 Hb_152910_010 Hb_005833_030--Hb_152910_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
62.5578 181.945 248.502 191.747 36.9637 86.7697
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
27.554 6.17027 15.5709 127.147 80.3781

CAGE analysis