Hb_065525_110

Information

Type -
Description -
Location Contig65525: 97371-100482
Sequence    

Annotation

kegg
ID tcc:TCM_016342
description Sporulation 11-2
nr
ID XP_012075842.1
description PREDICTED: meiotic recombination protein SPO11-2 [Jatropha curcas]
swissprot
ID Q9M4A1
description Meiotic recombination protein SPO11-2 OS=Arabidopsis thaliana GN=SPO11-2 PE=1 SV=1
trembl
ID A0A067KSH0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11275 PE=4 SV=1
Gene Ontology
ID GO:0005694
description meiotic recombination protein spo11-2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065525_110 0.0 - - PREDICTED: meiotic recombination protein SPO11-2 [Jatropha curcas]
2 Hb_002783_160 0.2353678986 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Jatropha curcas]
3 Hb_007943_160 0.235831627 - - PREDICTED: aspartate aminotransferase, cytoplasmic [Jatropha curcas]
4 Hb_003226_120 0.2473851384 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000011_290 0.2486020712 - - PREDICTED: alanine aminotransferase 2-like [Jatropha curcas]
6 Hb_000824_050 0.2584164142 - - PREDICTED: nicotinate phosphoribosyltransferase 1 [Jatropha curcas]
7 Hb_001699_200 0.2610261034 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic [Jatropha curcas]
8 Hb_002631_080 0.2663314853 - - glyceraldehyde 3-phosphate dehydrogenase, putative [Ricinus communis]
9 Hb_001009_080 0.2703280336 - - conserved hypothetical protein [Ricinus communis]
10 Hb_028872_110 0.2742111874 - - PREDICTED: uncharacterized protein LOC105644776 [Jatropha curcas]
11 Hb_000621_020 0.2745408478 - - PREDICTED: mannose-6-phosphate isomerase 1 [Jatropha curcas]
12 Hb_001104_100 0.2805601929 - - RecName: Full=Enolase 2; AltName: Full=2-phospho-D-glycerate hydro-lyase 2; AltName: Full=2-phosphoglycerate dehydratase 2; AltName: Allergen=Hev b 9 [Hevea brasiliensis]
13 Hb_150360_020 0.2817451642 - - PREDICTED: N-alpha-acetyltransferase 11 [Jatropha curcas]
14 Hb_000120_390 0.2849447428 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
15 Hb_000692_160 0.2866545781 - - Transportin 1 isoform 1 [Theobroma cacao]
16 Hb_000181_050 0.2868026464 - - PREDICTED: uncharacterized protein LOC105637463 [Jatropha curcas]
17 Hb_008226_070 0.2900402832 - - PREDICTED: expansin-A8 [Jatropha curcas]
18 Hb_000805_320 0.2904542408 - - PREDICTED: putative hydrolase C777.06c [Jatropha curcas]
19 Hb_004079_080 0.290820053 - - PREDICTED: ras-related protein RHN1-like [Jatropha curcas]
20 Hb_005873_010 0.2915487711 - - cysteine desulfurylase, putative [Ricinus communis]

Gene co-expression network

sample Hb_065525_110 Hb_065525_110 Hb_002783_160 Hb_002783_160 Hb_065525_110--Hb_002783_160 Hb_007943_160 Hb_007943_160 Hb_065525_110--Hb_007943_160 Hb_003226_120 Hb_003226_120 Hb_065525_110--Hb_003226_120 Hb_000011_290 Hb_000011_290 Hb_065525_110--Hb_000011_290 Hb_000824_050 Hb_000824_050 Hb_065525_110--Hb_000824_050 Hb_001699_200 Hb_001699_200 Hb_065525_110--Hb_001699_200 Hb_006569_030 Hb_006569_030 Hb_002783_160--Hb_006569_030 Hb_000329_060 Hb_000329_060 Hb_002783_160--Hb_000329_060 Hb_001476_060 Hb_001476_060 Hb_002783_160--Hb_001476_060 Hb_028872_110 Hb_028872_110 Hb_002783_160--Hb_028872_110 Hb_001332_040 Hb_001332_040 Hb_002783_160--Hb_001332_040 Hb_005147_030 Hb_005147_030 Hb_002783_160--Hb_005147_030 Hb_007943_160--Hb_003226_120 Hb_007943_160--Hb_000011_290 Hb_012545_090 Hb_012545_090 Hb_007943_160--Hb_012545_090 Hb_006275_010 Hb_006275_010 Hb_007943_160--Hb_006275_010 Hb_004079_080 Hb_004079_080 Hb_007943_160--Hb_004079_080 Hb_039145_010 Hb_039145_010 Hb_007943_160--Hb_039145_010 Hb_008226_070 Hb_008226_070 Hb_003226_120--Hb_008226_070 Hb_003226_120--Hb_028872_110 Hb_003226_120--Hb_004079_080 Hb_000159_120 Hb_000159_120 Hb_003226_120--Hb_000159_120 Hb_003906_170 Hb_003906_170 Hb_003226_120--Hb_003906_170 Hb_000011_290--Hb_001699_200 Hb_000011_290--Hb_004079_080 Hb_001971_060 Hb_001971_060 Hb_000011_290--Hb_001971_060 Hb_000061_090 Hb_000061_090 Hb_000011_290--Hb_000061_090 Hb_002539_020 Hb_002539_020 Hb_000011_290--Hb_002539_020 Hb_135757_020 Hb_135757_020 Hb_000824_050--Hb_135757_020 Hb_006922_090 Hb_006922_090 Hb_000824_050--Hb_006922_090 Hb_023827_020 Hb_023827_020 Hb_000824_050--Hb_023827_020 Hb_000679_190 Hb_000679_190 Hb_000824_050--Hb_000679_190 Hb_004094_020 Hb_004094_020 Hb_000824_050--Hb_004094_020 Hb_001946_310 Hb_001946_310 Hb_000824_050--Hb_001946_310 Hb_000614_170 Hb_000614_170 Hb_001699_200--Hb_000614_170 Hb_000320_300 Hb_000320_300 Hb_001699_200--Hb_000320_300 Hb_100147_010 Hb_100147_010 Hb_001699_200--Hb_100147_010 Hb_005873_010 Hb_005873_010 Hb_001699_200--Hb_005873_010 Hb_001699_200--Hb_001971_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0117838 0.0770662 0.259788 0.206401 0.110989
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.259388 0.076524 0.14359 0.733422 0.05329

CAGE analysis