Hb_058328_010

Information

Type -
Description -
Location Contig58328: 1199-1756
Sequence    

Annotation

kegg
ID tcc:TCM_029220
description CCAAT/enhancer-binding protein zeta isoform 3
nr
ID BAJ53201.1
description JHL06B08.2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NU91
description JHL06B08.2 protein OS=Jatropha curcas GN=JHL06B08.2 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_058328_010 0.0 - - JHL06B08.2 [Jatropha curcas]
2 Hb_005539_250 0.1902308789 - - -
3 Hb_001390_030 0.2736435468 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
4 Hb_000157_130 0.277047322 - - PREDICTED: cinnamoyl-CoA reductase 1-like isoform X2 [Populus euphratica]
5 Hb_004976_050 0.2780486157 - - -
6 Hb_003073_180 0.2796105987 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
7 Hb_004462_010 0.2859158611 - - PREDICTED: primary amine oxidase-like [Jatropha curcas]
8 Hb_001206_090 0.2937420853 - - pyruvate decarboxylase [Hevea brasiliensis]
9 Hb_004162_010 0.3015617142 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000364_200 0.3015654449 - - o-methyltransferase, putative [Ricinus communis]
11 Hb_003025_010 0.3020450742 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2 [Populus euphratica]
12 Hb_127886_010 0.30251484 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
13 Hb_004648_010 0.3050588086 - - UDP-galactose/UDP-glucose transporter 4 [Morus notabilis]
14 Hb_015057_050 0.3073811057 - - D-alanine aminotransferase, putative [Ricinus communis]
15 Hb_001101_030 0.3093774384 - - hypothetical protein JCGZ_00046 [Jatropha curcas]
16 Hb_006054_020 0.3121450532 - - conserved hypothetical protein [Ricinus communis]
17 Hb_007943_160 0.3129024003 - - PREDICTED: aspartate aminotransferase, cytoplasmic [Jatropha curcas]
18 Hb_000544_100 0.3188089946 - - hypothetical protein JCGZ_03636 [Jatropha curcas]
19 Hb_001623_090 0.3198719037 - - PREDICTED: probable serine incorporator [Jatropha curcas]
20 Hb_000244_280 0.3226669428 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_058328_010 Hb_058328_010 Hb_005539_250 Hb_005539_250 Hb_058328_010--Hb_005539_250 Hb_001390_030 Hb_001390_030 Hb_058328_010--Hb_001390_030 Hb_000157_130 Hb_000157_130 Hb_058328_010--Hb_000157_130 Hb_004976_050 Hb_004976_050 Hb_058328_010--Hb_004976_050 Hb_003073_180 Hb_003073_180 Hb_058328_010--Hb_003073_180 Hb_004462_010 Hb_004462_010 Hb_058328_010--Hb_004462_010 Hb_003124_090 Hb_003124_090 Hb_005539_250--Hb_003124_090 Hb_008494_050 Hb_008494_050 Hb_005539_250--Hb_008494_050 Hb_003992_230 Hb_003992_230 Hb_005539_250--Hb_003992_230 Hb_000302_090 Hb_000302_090 Hb_005539_250--Hb_000302_090 Hb_000364_200 Hb_000364_200 Hb_005539_250--Hb_000364_200 Hb_138710_010 Hb_138710_010 Hb_001390_030--Hb_138710_010 Hb_011633_040 Hb_011633_040 Hb_001390_030--Hb_011633_040 Hb_003813_120 Hb_003813_120 Hb_001390_030--Hb_003813_120 Hb_012545_090 Hb_012545_090 Hb_001390_030--Hb_012545_090 Hb_029921_030 Hb_029921_030 Hb_001390_030--Hb_029921_030 Hb_127886_010 Hb_127886_010 Hb_001390_030--Hb_127886_010 Hb_000157_130--Hb_003073_180 Hb_080147_100 Hb_080147_100 Hb_000157_130--Hb_080147_100 Hb_000157_130--Hb_001390_030 Hb_000157_130--Hb_003813_120 Hb_000805_320 Hb_000805_320 Hb_000157_130--Hb_000805_320 Hb_000157_130--Hb_004976_050 Hb_000011_290 Hb_000011_290 Hb_004976_050--Hb_000011_290 Hb_004976_050--Hb_138710_010 Hb_094437_060 Hb_094437_060 Hb_004976_050--Hb_094437_060 Hb_002849_090 Hb_002849_090 Hb_004976_050--Hb_002849_090 Hb_000879_190 Hb_000879_190 Hb_004976_050--Hb_000879_190 Hb_158092_060 Hb_158092_060 Hb_004976_050--Hb_158092_060 Hb_002407_080 Hb_002407_080 Hb_003073_180--Hb_002407_080 Hb_003073_180--Hb_000805_320 Hb_000209_110 Hb_000209_110 Hb_003073_180--Hb_000209_110 Hb_001258_060 Hb_001258_060 Hb_003073_180--Hb_001258_060 Hb_003073_180--Hb_080147_100 Hb_006586_030 Hb_006586_030 Hb_003073_180--Hb_006586_030 Hb_000544_100 Hb_000544_100 Hb_004462_010--Hb_000544_100 Hb_000093_150 Hb_000093_150 Hb_004462_010--Hb_000093_150 Hb_004462_010--Hb_127886_010 Hb_001524_090 Hb_001524_090 Hb_004462_010--Hb_001524_090 Hb_001636_020 Hb_001636_020 Hb_004462_010--Hb_001636_020 Hb_004462_010--Hb_000209_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.193404 0.171513 0.319539 0.208748 0 0.339446
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.180733 0.282335 1.65301 0

CAGE analysis