Hb_035123_010

Information

Type -
Description -
Location Contig35123: 67-546
Sequence    

Annotation

kegg
ID pop:POPTR_0017s01950g
description hypothetical protein
nr
ID KDP43125.1
description hypothetical protein JCGZ_26658 [Jatropha curcas]
swissprot
ID P0DKH6
description Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1
trembl
ID A0A067LF36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26658 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_035123_010 0.0 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
2 Hb_000855_020 0.0924147346 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Populus euphratica]
3 Hb_000656_250 0.1003944135 - - hypothetical protein JCGZ_24680 [Jatropha curcas]
4 Hb_005489_080 0.1032815139 - - conserved hypothetical protein [Ricinus communis]
5 Hb_009620_050 0.1057177318 - - PREDICTED: protein unc-45 homolog A [Jatropha curcas]
6 Hb_000780_230 0.1058498304 transcription factor TF Family: WRKY WRKY protein [Hevea brasiliensis]
7 Hb_004128_050 0.1060411593 transcription factor TF Family: C3H zinc finger protein, putative [Ricinus communis]
8 Hb_021409_040 0.109130424 - - PREDICTED: FAS-associated factor 2 [Jatropha curcas]
9 Hb_000366_120 0.1096762487 - - PREDICTED: chaperone protein dnaJ 49-like [Jatropha curcas]
10 Hb_000336_250 0.1103003529 transcription factor TF Family: mTERF hypothetical protein B456_002G027700 [Gossypium raimondii]
11 Hb_031527_020 0.1108057187 - - PREDICTED: pre-mRNA-splicing factor 38B isoform X1 [Jatropha curcas]
12 Hb_005993_050 0.1115648257 - - Protein AFR, putative [Ricinus communis]
13 Hb_000487_110 0.1119232745 - - PREDICTED: cyclin-T1-3-like [Jatropha curcas]
14 Hb_000003_290 0.1132785042 - - hypothetical protein JCGZ_24486 [Jatropha curcas]
15 Hb_007765_080 0.1134829183 - - PREDICTED: uncharacterized protein LOC105631001 isoform X2 [Jatropha curcas]
16 Hb_009503_030 0.114349531 - - protein dimerization, putative [Ricinus communis]
17 Hb_003777_160 0.1149275069 transcription factor TF Family: bZIP PREDICTED: G-box-binding factor 4 isoform X1 [Jatropha curcas]
18 Hb_001502_060 0.114965084 - - DNA mismatch repair protein MSH2, putative [Ricinus communis]
19 Hb_002686_250 0.1150479009 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 [Jatropha curcas]
20 Hb_003785_040 0.1152585959 - - PREDICTED: R3H domain-containing protein 2-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_035123_010 Hb_035123_010 Hb_000855_020 Hb_000855_020 Hb_035123_010--Hb_000855_020 Hb_000656_250 Hb_000656_250 Hb_035123_010--Hb_000656_250 Hb_005489_080 Hb_005489_080 Hb_035123_010--Hb_005489_080 Hb_009620_050 Hb_009620_050 Hb_035123_010--Hb_009620_050 Hb_000780_230 Hb_000780_230 Hb_035123_010--Hb_000780_230 Hb_004128_050 Hb_004128_050 Hb_035123_010--Hb_004128_050 Hb_001619_150 Hb_001619_150 Hb_000855_020--Hb_001619_150 Hb_007765_080 Hb_007765_080 Hb_000855_020--Hb_007765_080 Hb_000671_070 Hb_000671_070 Hb_000855_020--Hb_000671_070 Hb_004912_030 Hb_004912_030 Hb_000855_020--Hb_004912_030 Hb_089140_050 Hb_089140_050 Hb_000855_020--Hb_089140_050 Hb_002835_230 Hb_002835_230 Hb_000855_020--Hb_002835_230 Hb_002686_250 Hb_002686_250 Hb_000656_250--Hb_002686_250 Hb_002078_110 Hb_002078_110 Hb_000656_250--Hb_002078_110 Hb_000656_250--Hb_005489_080 Hb_000402_080 Hb_000402_080 Hb_000656_250--Hb_000402_080 Hb_000656_250--Hb_000780_230 Hb_131646_010 Hb_131646_010 Hb_000656_250--Hb_131646_010 Hb_031527_020 Hb_031527_020 Hb_005489_080--Hb_031527_020 Hb_000732_120 Hb_000732_120 Hb_005489_080--Hb_000732_120 Hb_005489_080--Hb_004128_050 Hb_003785_040 Hb_003785_040 Hb_005489_080--Hb_003785_040 Hb_111198_010 Hb_111198_010 Hb_005489_080--Hb_111198_010 Hb_002025_110 Hb_002025_110 Hb_005489_080--Hb_002025_110 Hb_000563_640 Hb_000563_640 Hb_009620_050--Hb_000563_640 Hb_006831_110 Hb_006831_110 Hb_009620_050--Hb_006831_110 Hb_005321_020 Hb_005321_020 Hb_009620_050--Hb_005321_020 Hb_000107_500 Hb_000107_500 Hb_009620_050--Hb_000107_500 Hb_002174_020 Hb_002174_020 Hb_009620_050--Hb_002174_020 Hb_002042_140 Hb_002042_140 Hb_009620_050--Hb_002042_140 Hb_000152_380 Hb_000152_380 Hb_000780_230--Hb_000152_380 Hb_000796_030 Hb_000796_030 Hb_000780_230--Hb_000796_030 Hb_002025_020 Hb_002025_020 Hb_000780_230--Hb_002025_020 Hb_013399_100 Hb_013399_100 Hb_000780_230--Hb_013399_100 Hb_001409_020 Hb_001409_020 Hb_000780_230--Hb_001409_020 Hb_000366_120 Hb_000366_120 Hb_000780_230--Hb_000366_120 Hb_006252_020 Hb_006252_020 Hb_004128_050--Hb_006252_020 Hb_004128_050--Hb_003785_040 Hb_004128_050--Hb_002042_140 Hb_000768_070 Hb_000768_070 Hb_004128_050--Hb_000768_070 Hb_000190_120 Hb_000190_120 Hb_004128_050--Hb_000190_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.3925 14.027 5.75951 10.5368 20.9257 9.36404
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.7786 9.47842 10.4226 5.32218 8.98544

CAGE analysis