Hb_009620_050

Information

Type -
Description -
Location Contig9620: 31623-34457
Sequence    

Annotation

kegg
ID rcu:RCOM_0463560
description heat shock protein 70 (HSP70)-interacting protein, putative
nr
ID XP_012087387.1
description PREDICTED: protein unc-45 homolog A [Jatropha curcas]
swissprot
ID Q32PZ3
description Protein unc-45 homolog A OS=Rattus norvegicus GN=Unc45a PE=2 SV=1
trembl
ID A0A067JQH5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22633 PE=4 SV=1
Gene Ontology
ID GO:0016853
description protein unc-45 homolog a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63777: 34103-34325
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009620_050 0.0 - - PREDICTED: protein unc-45 homolog A [Jatropha curcas]
2 Hb_000563_640 0.0470217657 - - PREDICTED: chaperone protein dnaJ 49 [Jatropha curcas]
3 Hb_006831_110 0.0602808022 - - PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Jatropha curcas]
4 Hb_005321_020 0.0718684132 - - splicing factor-related family protein [Populus trichocarpa]
5 Hb_000107_500 0.0732267555 - - PREDICTED: protein FAR1-RELATED SEQUENCE 9 [Jatropha curcas]
6 Hb_002174_020 0.0742024351 - - ring finger protein, putative [Ricinus communis]
7 Hb_002042_140 0.0742155613 - - PREDICTED: uncharacterized protein LOC105647570 [Jatropha curcas]
8 Hb_002615_090 0.0791742146 - - PREDICTED: protein SMG7 isoform X1 [Jatropha curcas]
9 Hb_004128_050 0.0823198081 transcription factor TF Family: C3H zinc finger protein, putative [Ricinus communis]
10 Hb_005993_050 0.083784936 - - Protein AFR, putative [Ricinus communis]
11 Hb_000645_120 0.086260198 - - PREDICTED: ubiquitin-conjugating enzyme E2 32 [Jatropha curcas]
12 Hb_001454_280 0.0864889065 - - PREDICTED: chaperone protein dnaJ 49 [Jatropha curcas]
13 Hb_000922_370 0.0866650625 - - PREDICTED: uncharacterized protein LOC105640366 [Jatropha curcas]
14 Hb_000283_070 0.0867788027 - - PREDICTED: T-complex protein 1 subunit delta [Jatropha curcas]
15 Hb_008864_110 0.0869583603 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI2 [Jatropha curcas]
16 Hb_002221_050 0.0878762778 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP65 isoform X1 [Jatropha curcas]
17 Hb_000479_220 0.0886404445 - - PREDICTED: uncharacterized protein LOC105644125 [Jatropha curcas]
18 Hb_002301_080 0.0896593969 transcription factor TF Family: HB PREDICTED: uncharacterized protein LOC105649589 isoform X2 [Jatropha curcas]
19 Hb_003605_130 0.0905808073 - - PREDICTED: probable arabinosyltransferase ARAD1 [Populus euphratica]
20 Hb_000574_440 0.0918344692 - - PREDICTED: uncharacterized protein LOC105634833 [Jatropha curcas]

Gene co-expression network

sample Hb_009620_050 Hb_009620_050 Hb_000563_640 Hb_000563_640 Hb_009620_050--Hb_000563_640 Hb_006831_110 Hb_006831_110 Hb_009620_050--Hb_006831_110 Hb_005321_020 Hb_005321_020 Hb_009620_050--Hb_005321_020 Hb_000107_500 Hb_000107_500 Hb_009620_050--Hb_000107_500 Hb_002174_020 Hb_002174_020 Hb_009620_050--Hb_002174_020 Hb_002042_140 Hb_002042_140 Hb_009620_050--Hb_002042_140 Hb_000563_640--Hb_005321_020 Hb_002615_090 Hb_002615_090 Hb_000563_640--Hb_002615_090 Hb_000563_640--Hb_006831_110 Hb_000922_370 Hb_000922_370 Hb_000563_640--Hb_000922_370 Hb_074969_010 Hb_074969_010 Hb_000563_640--Hb_074969_010 Hb_000071_030 Hb_000071_030 Hb_006831_110--Hb_000071_030 Hb_006831_110--Hb_002042_140 Hb_006831_110--Hb_005321_020 Hb_000283_070 Hb_000283_070 Hb_006831_110--Hb_000283_070 Hb_006831_110--Hb_000107_500 Hb_000645_120 Hb_000645_120 Hb_005321_020--Hb_000645_120 Hb_003531_060 Hb_003531_060 Hb_005321_020--Hb_003531_060 Hb_005321_020--Hb_000283_070 Hb_000107_500--Hb_000283_070 Hb_001541_020 Hb_001541_020 Hb_000107_500--Hb_001541_020 Hb_000002_040 Hb_000002_040 Hb_000107_500--Hb_000002_040 Hb_000510_310 Hb_000510_310 Hb_000107_500--Hb_000510_310 Hb_000025_360 Hb_000025_360 Hb_000107_500--Hb_000025_360 Hb_008112_030 Hb_008112_030 Hb_002174_020--Hb_008112_030 Hb_001454_280 Hb_001454_280 Hb_002174_020--Hb_001454_280 Hb_006252_020 Hb_006252_020 Hb_002174_020--Hb_006252_020 Hb_000160_290 Hb_000160_290 Hb_002174_020--Hb_000160_290 Hb_005731_090 Hb_005731_090 Hb_002174_020--Hb_005731_090 Hb_007635_030 Hb_007635_030 Hb_002174_020--Hb_007635_030 Hb_002042_140--Hb_000002_040 Hb_004128_050 Hb_004128_050 Hb_002042_140--Hb_004128_050 Hb_010695_020 Hb_010695_020 Hb_002042_140--Hb_010695_020 Hb_000743_040 Hb_000743_040 Hb_002042_140--Hb_000743_040 Hb_007558_120 Hb_007558_120 Hb_002042_140--Hb_007558_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.9944 8.36343 3.38881 6.2339 9.51223 8.80194
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.6483 3.42754 5.79875 3.79633 4.76523

CAGE analysis