Hb_034482_010

Information

Type -
Description -
Location Contig34482: 6750-8440
Sequence    

Annotation

kegg
ID rcu:RCOM_0742110
description hypothetical protein
nr
ID XP_002525512.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SHP3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0742110 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034482_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001723_120 0.3136407857 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000895_080 0.3277276642 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1-like [Jatropha curcas]
4 Hb_033870_010 0.342748571 - - PREDICTED: uncharacterized protein LOC104101109 isoform X1 [Nicotiana tomentosiformis]
5 Hb_033546_020 0.3561167095 - - xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis]
6 Hb_000032_050 0.3605920597 - - hypothetical protein RCOM_1691130 [Ricinus communis]
7 Hb_056559_010 0.3816913673 - - PREDICTED: uncharacterized protein LOC104088595 [Nicotiana tomentosiformis]
8 Hb_161294_010 0.3834378976 - - PREDICTED: serine/threonine-protein kinase ppk15 isoform X2 [Jatropha curcas]
9 Hb_001449_030 0.3926475089 - - PREDICTED: RNA polymerase II-associated protein 3 isoform X3 [Jatropha curcas]
10 Hb_000367_110 0.3949392797 - - PREDICTED: monodehydroascorbate reductase, chloroplastic isoform X1 [Sesamum indicum]
11 Hb_087388_010 0.396273392 transcription factor TF Family: bHLH PREDICTED: transcription factor DYT1 [Jatropha curcas]
12 Hb_001021_180 0.400457095 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Nicotiana tomentosiformis]
13 Hb_033354_020 0.4037252634 - - ABC transporter family protein [Hevea brasiliensis]
14 Hb_011485_090 0.4038858967 - - -
15 Hb_000331_120 0.4048339216 - - conserved hypothetical protein [Ricinus communis]
16 Hb_009748_010 0.4048402064 - - PREDICTED: endoglucanase 6 [Jatropha curcas]
17 Hb_000139_490 0.4052583001 - - PREDICTED: transcription factor MUTE [Jatropha curcas]
18 Hb_002732_030 0.4063425207 transcription factor TF Family: AP2 PREDICTED: ethylene-responsive transcription factor RAP2-7 isoform X1 [Jatropha curcas]
19 Hb_005489_030 0.4072204391 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
20 Hb_004032_340 0.4085089977 - - PREDICTED: mitotic spindle checkpoint protein BUBR1 [Jatropha curcas]

Gene co-expression network

sample Hb_034482_010 Hb_034482_010 Hb_001723_120 Hb_001723_120 Hb_034482_010--Hb_001723_120 Hb_000895_080 Hb_000895_080 Hb_034482_010--Hb_000895_080 Hb_033870_010 Hb_033870_010 Hb_034482_010--Hb_033870_010 Hb_033546_020 Hb_033546_020 Hb_034482_010--Hb_033546_020 Hb_000032_050 Hb_000032_050 Hb_034482_010--Hb_000032_050 Hb_056559_010 Hb_056559_010 Hb_034482_010--Hb_056559_010 Hb_003910_010 Hb_003910_010 Hb_001723_120--Hb_003910_010 Hb_000331_120 Hb_000331_120 Hb_001723_120--Hb_000331_120 Hb_000863_030 Hb_000863_030 Hb_001723_120--Hb_000863_030 Hb_003893_140 Hb_003893_140 Hb_001723_120--Hb_003893_140 Hb_001476_060 Hb_001476_060 Hb_001723_120--Hb_001476_060 Hb_002301_360 Hb_002301_360 Hb_001723_120--Hb_002301_360 Hb_000895_080--Hb_033870_010 Hb_000895_080--Hb_000032_050 Hb_000895_080--Hb_033546_020 Hb_007273_020 Hb_007273_020 Hb_000895_080--Hb_007273_020 Hb_001377_280 Hb_001377_280 Hb_000895_080--Hb_001377_280 Hb_113739_010 Hb_113739_010 Hb_000895_080--Hb_113739_010 Hb_000329_260 Hb_000329_260 Hb_033870_010--Hb_000329_260 Hb_033870_010--Hb_000032_050 Hb_001864_090 Hb_001864_090 Hb_033870_010--Hb_001864_090 Hb_001417_080 Hb_001417_080 Hb_033870_010--Hb_001417_080 Hb_033870_010--Hb_033546_020 Hb_001377_300 Hb_001377_300 Hb_033546_020--Hb_001377_300 Hb_001998_170 Hb_001998_170 Hb_033546_020--Hb_001998_170 Hb_113084_010 Hb_113084_010 Hb_033546_020--Hb_113084_010 Hb_003906_020 Hb_003906_020 Hb_033546_020--Hb_003906_020 Hb_007889_020 Hb_007889_020 Hb_033546_020--Hb_007889_020 Hb_000311_040 Hb_000311_040 Hb_033546_020--Hb_000311_040 Hb_001922_180 Hb_001922_180 Hb_000032_050--Hb_001922_180 Hb_000445_170 Hb_000445_170 Hb_000032_050--Hb_000445_170 Hb_000032_050--Hb_113739_010 Hb_000109_230 Hb_000109_230 Hb_000032_050--Hb_000109_230 Hb_033354_020 Hb_033354_020 Hb_000032_050--Hb_033354_020 Hb_001828_100 Hb_001828_100 Hb_000032_050--Hb_001828_100 Hb_007101_010 Hb_007101_010 Hb_056559_010--Hb_007101_010 Hb_056559_010--Hb_033870_010 Hb_056559_010--Hb_000329_260 Hb_113733_010 Hb_113733_010 Hb_056559_010--Hb_113733_010 Hb_000035_280 Hb_000035_280 Hb_056559_010--Hb_000035_280 Hb_000174_010 Hb_000174_010 Hb_056559_010--Hb_000174_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.393516 0 0.15538 0.702223 0 0.0800609
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.573054 0 0 0.185677 0

CAGE analysis