Hb_033683_020

Information

Type -
Description -
Location Contig33683: 58379-59217
Sequence    

Annotation

kegg
ID pop:POPTR_1072s00200g
description hypothetical protein
nr
ID XP_006387410.1
description hypothetical protein POPTR_1072s00200g [Populus trichocarpa]
swissprot
ID -
description -
trembl
ID U7DVW9
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_1072s00200g PE=4 SV=1
Gene Ontology
ID GO:0052834
description myo-inositol monophosphatase like 1 isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033683_020 0.0 - - hypothetical protein POPTR_1072s00200g [Populus trichocarpa]
2 Hb_003397_020 0.175591993 - - -
3 Hb_033683_010 0.1852927705 - - myo inositol monophosphatase, putative [Ricinus communis]
4 Hb_000950_030 0.1937764142 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g10290 [Nelumbo nucifera]
5 Hb_004627_010 0.1961085896 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002157_270 0.201125439 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
7 Hb_057556_010 0.212069425 - - Light-regulated protein precursor, putative [Ricinus communis]
8 Hb_048702_010 0.2122982526 - - PREDICTED: ER membrane protein complex subunit 7 homolog isoform X1 [Jatropha curcas]
9 Hb_007456_020 0.2138968908 - - unknown [Lotus japonicus]
10 Hb_002596_080 0.2172982648 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g04160 [Jatropha curcas]
11 Hb_002909_110 0.2224882444 - - PREDICTED: uncharacterized protein LOC105648153 [Jatropha curcas]
12 Hb_001493_060 0.2224940439 - - PREDICTED: uncharacterized protein LOC105631313 [Jatropha curcas]
13 Hb_000580_110 0.2238805821 - - PREDICTED: UDP-glucuronate 4-epimerase 3 [Jatropha curcas]
14 Hb_012707_010 0.2259472574 - - PREDICTED: uncharacterized protein C594.04c [Jatropha curcas]
15 Hb_000236_190 0.2265062096 - - PREDICTED: adenosylhomocysteinase 1 [Jatropha curcas]
16 Hb_000300_420 0.226964259 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
17 Hb_008206_090 0.231093099 - - PREDICTED: uncharacterized protein LOC100811033 [Glycine max]
18 Hb_000445_150 0.2318962238 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
19 Hb_044486_030 0.233612389 - - DMI1, partial [Cycas revoluta]
20 Hb_004055_020 0.2337809038 - - PREDICTED: uncharacterized protein LOC105631433 [Jatropha curcas]

Gene co-expression network

sample Hb_033683_020 Hb_033683_020 Hb_003397_020 Hb_003397_020 Hb_033683_020--Hb_003397_020 Hb_033683_010 Hb_033683_010 Hb_033683_020--Hb_033683_010 Hb_000950_030 Hb_000950_030 Hb_033683_020--Hb_000950_030 Hb_004627_010 Hb_004627_010 Hb_033683_020--Hb_004627_010 Hb_002157_270 Hb_002157_270 Hb_033683_020--Hb_002157_270 Hb_057556_010 Hb_057556_010 Hb_033683_020--Hb_057556_010 Hb_000115_370 Hb_000115_370 Hb_003397_020--Hb_000115_370 Hb_003397_020--Hb_000950_030 Hb_169018_010 Hb_169018_010 Hb_003397_020--Hb_169018_010 Hb_003397_020--Hb_004627_010 Hb_004055_020 Hb_004055_020 Hb_003397_020--Hb_004055_020 Hb_035834_010 Hb_035834_010 Hb_033683_010--Hb_035834_010 Hb_036388_010 Hb_036388_010 Hb_033683_010--Hb_036388_010 Hb_000768_150 Hb_000768_150 Hb_033683_010--Hb_000768_150 Hb_000997_320 Hb_000997_320 Hb_033683_010--Hb_000997_320 Hb_000347_190 Hb_000347_190 Hb_033683_010--Hb_000347_190 Hb_001365_010 Hb_001365_010 Hb_033683_010--Hb_001365_010 Hb_000950_030--Hb_002157_270 Hb_012707_010 Hb_012707_010 Hb_000950_030--Hb_012707_010 Hb_000950_030--Hb_004055_020 Hb_000806_130 Hb_000806_130 Hb_000950_030--Hb_000806_130 Hb_001486_350 Hb_001486_350 Hb_000950_030--Hb_001486_350 Hb_006634_110 Hb_006634_110 Hb_000950_030--Hb_006634_110 Hb_150486_010 Hb_150486_010 Hb_004627_010--Hb_150486_010 Hb_004627_010--Hb_002157_270 Hb_004627_010--Hb_000950_030 Hb_000925_060 Hb_000925_060 Hb_004627_010--Hb_000925_060 Hb_048702_010 Hb_048702_010 Hb_004627_010--Hb_048702_010 Hb_011310_040 Hb_011310_040 Hb_002157_270--Hb_011310_040 Hb_002129_020 Hb_002129_020 Hb_002157_270--Hb_002129_020 Hb_002596_080 Hb_002596_080 Hb_002157_270--Hb_002596_080 Hb_001493_060 Hb_001493_060 Hb_002157_270--Hb_001493_060 Hb_002164_020 Hb_002164_020 Hb_002157_270--Hb_002164_020 Hb_001621_100 Hb_001621_100 Hb_057556_010--Hb_001621_100 Hb_001546_010 Hb_001546_010 Hb_057556_010--Hb_001546_010 Hb_008695_220 Hb_008695_220 Hb_057556_010--Hb_008695_220 Hb_057556_010--Hb_000950_030 Hb_000580_110 Hb_000580_110 Hb_057556_010--Hb_000580_110 Hb_000417_400 Hb_000417_400 Hb_057556_010--Hb_000417_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.595703 1.01756 3.87663 44.4367 1.39456 12.8139
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.84751 1.6002 1.94981 13.6784 35.7212

CAGE analysis