Hb_033683_010

Information

Type -
Description -
Location Contig33683: 5768-12990
Sequence    

Annotation

kegg
ID rcu:RCOM_1289520
description myo inositol monophosphatase, putative (EC:3.1.3.25)
nr
ID XP_002524125.1
description myo inositol monophosphatase, putative [Ricinus communis]
swissprot
ID Q94F00
description Phosphatase IMPL1, chloroplastic OS=Arabidopsis thaliana GN=IMPL1 PE=1 SV=2
trembl
ID B9SDQ6
description Myo inositol monophosphatase, putative OS=Ricinus communis GN=RCOM_1289520 PE=4 SV=1
Gene Ontology
ID GO:0005829
description phosphatase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033683_010 0.0 - - myo inositol monophosphatase, putative [Ricinus communis]
2 Hb_035834_010 0.1220985466 - - zinc finger protein, putative [Ricinus communis]
3 Hb_036388_010 0.1305459941 - - PREDICTED: formate--tetrahydrofolate ligase [Populus euphratica]
4 Hb_000768_150 0.1459079835 - - PREDICTED: glycine-rich protein A3-like [Fragaria vesca subsp. vesca]
5 Hb_000997_320 0.1478467451 - - PREDICTED: acylamino-acid-releasing enzyme-like [Malus domestica]
6 Hb_000347_190 0.1561163766 - - PREDICTED: transmembrane protein 87A [Jatropha curcas]
7 Hb_001365_010 0.161074539 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
8 Hb_001493_060 0.1614770839 - - PREDICTED: uncharacterized protein LOC105631313 [Jatropha curcas]
9 Hb_000120_740 0.1635992369 desease resistance Gene Name: VARLMGL conserved hypothetical protein [Ricinus communis]
10 Hb_010984_020 0.1672655829 - - Translation factor GUF1 like, chloroplastic [Glycine soja]
11 Hb_002164_020 0.1676929728 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001584_340 0.1680224914 - - PREDICTED: ATP-citrate synthase alpha chain protein 2 [Jatropha curcas]
13 Hb_014497_060 0.1700739579 - - phosphofructokinase, putative [Ricinus communis]
14 Hb_169656_010 0.1742754142 - - protein phosphatase, putative [Ricinus communis]
15 Hb_003783_050 0.1752615798 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002305_010 0.1765273357 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
17 Hb_000167_040 0.1815652362 - - PREDICTED: serine carboxypeptidase-like [Jatropha curcas]
18 Hb_030312_030 0.181659204 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Jatropha curcas]
19 Hb_000300_680 0.1822042435 - - PREDICTED: uncharacterized protein LOC105632625 isoform X1 [Jatropha curcas]
20 Hb_003777_250 0.1822347153 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]

Gene co-expression network

sample Hb_033683_010 Hb_033683_010 Hb_035834_010 Hb_035834_010 Hb_033683_010--Hb_035834_010 Hb_036388_010 Hb_036388_010 Hb_033683_010--Hb_036388_010 Hb_000768_150 Hb_000768_150 Hb_033683_010--Hb_000768_150 Hb_000997_320 Hb_000997_320 Hb_033683_010--Hb_000997_320 Hb_000347_190 Hb_000347_190 Hb_033683_010--Hb_000347_190 Hb_001365_010 Hb_001365_010 Hb_033683_010--Hb_001365_010 Hb_035834_010--Hb_036388_010 Hb_000445_370 Hb_000445_370 Hb_035834_010--Hb_000445_370 Hb_003783_050 Hb_003783_050 Hb_035834_010--Hb_003783_050 Hb_000441_050 Hb_000441_050 Hb_035834_010--Hb_000441_050 Hb_004242_170 Hb_004242_170 Hb_035834_010--Hb_004242_170 Hb_000120_740 Hb_000120_740 Hb_035834_010--Hb_000120_740 Hb_036388_010--Hb_000768_150 Hb_036388_010--Hb_003783_050 Hb_036388_010--Hb_000997_320 Hb_006736_050 Hb_006736_050 Hb_036388_010--Hb_006736_050 Hb_000417_380 Hb_000417_380 Hb_036388_010--Hb_000417_380 Hb_030312_030 Hb_030312_030 Hb_000768_150--Hb_030312_030 Hb_012053_020 Hb_012053_020 Hb_000768_150--Hb_012053_020 Hb_009803_020 Hb_009803_020 Hb_000768_150--Hb_009803_020 Hb_004326_010 Hb_004326_010 Hb_000768_150--Hb_004326_010 Hb_000768_150--Hb_000997_320 Hb_001195_370 Hb_001195_370 Hb_000997_320--Hb_001195_370 Hb_000997_320--Hb_030312_030 Hb_001054_060 Hb_001054_060 Hb_000997_320--Hb_001054_060 Hb_000329_080 Hb_000329_080 Hb_000997_320--Hb_000329_080 Hb_001493_060 Hb_001493_060 Hb_000347_190--Hb_001493_060 Hb_000347_190--Hb_004242_170 Hb_000350_030 Hb_000350_030 Hb_000347_190--Hb_000350_030 Hb_003006_090 Hb_003006_090 Hb_000347_190--Hb_003006_090 Hb_001677_040 Hb_001677_040 Hb_000347_190--Hb_001677_040 Hb_000347_190--Hb_035834_010 Hb_001365_020 Hb_001365_020 Hb_001365_010--Hb_001365_020 Hb_001365_010--Hb_000329_080 Hb_000163_110 Hb_000163_110 Hb_001365_010--Hb_000163_110 Hb_001365_010--Hb_000441_050 Hb_001365_010--Hb_003783_050 Hb_001365_010--Hb_035834_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.07124 2.8613 17.5027 37.6158 3.01251 10.6012
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.13037 1.77008 2.52027 20.5664 42.4894

CAGE analysis