Hb_000115_370

Information

Type -
Description -
Location Contig115: 410869-426760
Sequence    

Annotation

kegg
ID rcu:RCOM_1310510
description mitochondrial carrier protein, putative
nr
ID XP_012082144.1
description PREDICTED: nicotinamide adenine dinucleotide transporter 2, mitochondrial [Jatropha curcas]
swissprot
ID Q8RWA5
description Nicotinamide adenine dinucleotide transporter 2, mitochondrial OS=Arabidopsis thaliana GN=NDT2 PE=1 SV=1
trembl
ID A0A067JZZ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18373 PE=3 SV=1
Gene Ontology
ID GO:0016020
description nicotinamide adenine dinucleotide transporter mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04553: 410579-411568 , PASA_asmbl_04554: 413750-413963
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000115_370 0.0 - - PREDICTED: nicotinamide adenine dinucleotide transporter 2, mitochondrial [Jatropha curcas]
2 Hb_169018_010 0.087955593 - - hypothetical protein POPTR_0014s00800g [Populus trichocarpa]
3 Hb_003968_030 0.1950774785 - - UDP-glucosyltransferase, putative [Ricinus communis]
4 Hb_003397_020 0.196721909 - - -
5 Hb_149507_010 0.1977350052 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Malus domestica]
6 Hb_002370_020 0.1986828605 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
7 Hb_146036_010 0.2014325215 - - hypothetical protein B456_005G052500 [Gossypium raimondii]
8 Hb_003371_280 0.2018465639 - - unnamed protein product [Vitis vinifera]
9 Hb_000910_060 0.2064601176 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
10 Hb_000635_100 0.2100604054 - - -
11 Hb_000866_400 0.2106204591 - - -
12 Hb_000186_150 0.211392662 - - PREDICTED: light-induced protein, chloroplastic-like [Nicotiana sylvestris]
13 Hb_000933_170 0.2115845851 - - PREDICTED: uncharacterized protein At5g01610 [Jatropha curcas]
14 Hb_011709_010 0.2130194682 - - PREDICTED: phytosulfokine receptor 1-like [Jatropha curcas]
15 Hb_001430_040 0.2149752254 - - gamma-tocopherol methyltransferase [Hevea brasiliensis]
16 Hb_141194_020 0.2170737274 - - carbohydrate transporter, putative [Ricinus communis]
17 Hb_001143_210 0.2176945602 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Jatropha curcas]
18 Hb_001277_010 0.2178981266 - - unknown [Populus trichocarpa]
19 Hb_025623_010 0.2207173716 - - -
20 Hb_113766_010 0.2208421434 - - plasma membrane H+ ATPase, partial [Nicotiana plumbaginifolia]

Gene co-expression network

sample Hb_000115_370 Hb_000115_370 Hb_169018_010 Hb_169018_010 Hb_000115_370--Hb_169018_010 Hb_003968_030 Hb_003968_030 Hb_000115_370--Hb_003968_030 Hb_003397_020 Hb_003397_020 Hb_000115_370--Hb_003397_020 Hb_149507_010 Hb_149507_010 Hb_000115_370--Hb_149507_010 Hb_002370_020 Hb_002370_020 Hb_000115_370--Hb_002370_020 Hb_146036_010 Hb_146036_010 Hb_000115_370--Hb_146036_010 Hb_001276_030 Hb_001276_030 Hb_169018_010--Hb_001276_030 Hb_011082_030 Hb_011082_030 Hb_169018_010--Hb_011082_030 Hb_031579_010 Hb_031579_010 Hb_169018_010--Hb_031579_010 Hb_011709_010 Hb_011709_010 Hb_169018_010--Hb_011709_010 Hb_169018_010--Hb_003968_030 Hb_001430_040 Hb_001430_040 Hb_003968_030--Hb_001430_040 Hb_003968_030--Hb_146036_010 Hb_000635_100 Hb_000635_100 Hb_003968_030--Hb_000635_100 Hb_000186_150 Hb_000186_150 Hb_003968_030--Hb_000186_150 Hb_003968_030--Hb_149507_010 Hb_005332_160 Hb_005332_160 Hb_003968_030--Hb_005332_160 Hb_033683_020 Hb_033683_020 Hb_003397_020--Hb_033683_020 Hb_000950_030 Hb_000950_030 Hb_003397_020--Hb_000950_030 Hb_003397_020--Hb_169018_010 Hb_004627_010 Hb_004627_010 Hb_003397_020--Hb_004627_010 Hb_004055_020 Hb_004055_020 Hb_003397_020--Hb_004055_020 Hb_149507_010--Hb_002370_020 Hb_001269_660 Hb_001269_660 Hb_149507_010--Hb_001269_660 Hb_012395_060 Hb_012395_060 Hb_149507_010--Hb_012395_060 Hb_001277_010 Hb_001277_010 Hb_149507_010--Hb_001277_010 Hb_025623_010 Hb_025623_010 Hb_149507_010--Hb_025623_010 Hb_000866_400 Hb_000866_400 Hb_149507_010--Hb_000866_400 Hb_002370_020--Hb_000866_400 Hb_002370_020--Hb_025623_010 Hb_003371_280 Hb_003371_280 Hb_002370_020--Hb_003371_280 Hb_002370_020--Hb_001269_660 Hb_002374_510 Hb_002374_510 Hb_002370_020--Hb_002374_510 Hb_146036_010--Hb_000186_150 Hb_146036_010--Hb_001430_040 Hb_000034_060 Hb_000034_060 Hb_146036_010--Hb_000034_060 Hb_003124_050 Hb_003124_050 Hb_146036_010--Hb_003124_050 Hb_146036_010--Hb_005332_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0157526 0.0714203 0 0.0102771
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0151096 0.0400345

CAGE analysis