Hb_027913_020

Information

Type -
Description -
Location Contig27913: 29482-35491
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027913_020 0.0 - - -
2 Hb_000389_180 0.215916188 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
3 Hb_000120_580 0.259714508 - - hypothetical protein POPTR_0007s08570g [Populus trichocarpa]
4 Hb_087596_010 0.2679673818 - - PREDICTED: disease resistance protein RPS4-like [Jatropha curcas]
5 Hb_108884_010 0.269065525 - - PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Prunus mume]
6 Hb_004316_120 0.2696969198 - - PREDICTED: E3 ubiquitin-protein ligase UPL5-like isoform X2 [Populus euphratica]
7 Hb_006788_120 0.2758138697 - - PREDICTED: beta-carotene isomerase D27, chloroplastic [Jatropha curcas]
8 Hb_000995_050 0.2802224174 - - 40S ribosomal protein S17C [Hevea brasiliensis]
9 Hb_000243_010 0.2803754596 - - PREDICTED: uncharacterized protein LOC105639166 [Jatropha curcas]
10 Hb_000003_350 0.2812128934 - - hypothetical protein POPTR_1155s00200g, partial [Populus trichocarpa]
11 Hb_000261_040 0.2840296725 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
12 Hb_005690_020 0.286060986 - - hypothetical protein POPTR_0006s08200g [Populus trichocarpa]
13 Hb_123202_010 0.2865185716 - - thioredoxin h [Hevea brasiliensis]
14 Hb_000575_080 0.2875281115 - - PREDICTED: CD2 antigen cytoplasmic tail-binding protein 2 isoform X1 [Jatropha curcas]
15 Hb_080147_090 0.2893581282 - - hypothetical protein JCGZ_07271 [Jatropha curcas]
16 Hb_000395_080 0.289367191 - - PREDICTED: uncharacterized protein LOC105645573 isoform X1 [Jatropha curcas]
17 Hb_175069_010 0.2899936853 - - hypothetical protein POPTR_0002s210401g, partial [Populus trichocarpa]
18 Hb_120221_010 0.2905793136 - - -
19 Hb_000608_420 0.2921760627 - - PREDICTED: endoribonuclease Dicer homolog 2 [Jatropha curcas]
20 Hb_142898_010 0.2933105967 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_027913_020 Hb_027913_020 Hb_000389_180 Hb_000389_180 Hb_027913_020--Hb_000389_180 Hb_000120_580 Hb_000120_580 Hb_027913_020--Hb_000120_580 Hb_087596_010 Hb_087596_010 Hb_027913_020--Hb_087596_010 Hb_108884_010 Hb_108884_010 Hb_027913_020--Hb_108884_010 Hb_004316_120 Hb_004316_120 Hb_027913_020--Hb_004316_120 Hb_006788_120 Hb_006788_120 Hb_027913_020--Hb_006788_120 Hb_000389_180--Hb_004316_120 Hb_165026_020 Hb_165026_020 Hb_000389_180--Hb_165026_020 Hb_003750_080 Hb_003750_080 Hb_000389_180--Hb_003750_080 Hb_005147_090 Hb_005147_090 Hb_000389_180--Hb_005147_090 Hb_008103_120 Hb_008103_120 Hb_000389_180--Hb_008103_120 Hb_000592_050 Hb_000592_050 Hb_000389_180--Hb_000592_050 Hb_001153_200 Hb_001153_200 Hb_000120_580--Hb_001153_200 Hb_009974_030 Hb_009974_030 Hb_000120_580--Hb_009974_030 Hb_001278_050 Hb_001278_050 Hb_000120_580--Hb_001278_050 Hb_001143_090 Hb_001143_090 Hb_000120_580--Hb_001143_090 Hb_001329_210 Hb_001329_210 Hb_000120_580--Hb_001329_210 Hb_001012_040 Hb_001012_040 Hb_000120_580--Hb_001012_040 Hb_000575_150 Hb_000575_150 Hb_087596_010--Hb_000575_150 Hb_000777_030 Hb_000777_030 Hb_087596_010--Hb_000777_030 Hb_004230_040 Hb_004230_040 Hb_087596_010--Hb_004230_040 Hb_000016_100 Hb_000016_100 Hb_087596_010--Hb_000016_100 Hb_001969_090 Hb_001969_090 Hb_087596_010--Hb_001969_090 Hb_000914_090 Hb_000914_090 Hb_087596_010--Hb_000914_090 Hb_001017_120 Hb_001017_120 Hb_108884_010--Hb_001017_120 Hb_021576_060 Hb_021576_060 Hb_108884_010--Hb_021576_060 Hb_002234_190 Hb_002234_190 Hb_108884_010--Hb_002234_190 Hb_004586_450 Hb_004586_450 Hb_108884_010--Hb_004586_450 Hb_137461_010 Hb_137461_010 Hb_108884_010--Hb_137461_010 Hb_189118_010 Hb_189118_010 Hb_004316_120--Hb_189118_010 Hb_010710_010 Hb_010710_010 Hb_004316_120--Hb_010710_010 Hb_000977_310 Hb_000977_310 Hb_004316_120--Hb_000977_310 Hb_001307_140 Hb_001307_140 Hb_004316_120--Hb_001307_140 Hb_000386_030 Hb_000386_030 Hb_004316_120--Hb_000386_030 Hb_001454_060 Hb_001454_060 Hb_004316_120--Hb_001454_060 Hb_003038_210 Hb_003038_210 Hb_006788_120--Hb_003038_210 Hb_000416_070 Hb_000416_070 Hb_006788_120--Hb_000416_070 Hb_020400_030 Hb_020400_030 Hb_006788_120--Hb_020400_030 Hb_003498_090 Hb_003498_090 Hb_006788_120--Hb_003498_090 Hb_007101_300 Hb_007101_300 Hb_006788_120--Hb_007101_300 Hb_000009_240 Hb_000009_240 Hb_006788_120--Hb_000009_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.077324 0 0.0142447 0.0535254 0.127923
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.127562 0.066893 0.0620916 0.0268166 0

CAGE analysis