Hb_026527_040

Information

Type -
Description -
Location Contig26527: 25625-26167
Sequence    

Annotation

kegg
ID rcu:RCOM_1189200
description hypothetical protein
nr
ID XP_002516318.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RRE9
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1189200 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026527_040 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001421_050 0.259454149 - - -
3 Hb_000111_400 0.2703747157 - - hypothetical protein POPTR_0003s19310g [Populus trichocarpa]
4 Hb_006925_090 0.2950866228 - - PREDICTED: protein HAPLESS 2 [Populus euphratica]
5 Hb_034904_010 0.2988287313 - - PREDICTED: uncharacterized protein LOC105775231 [Gossypium raimondii]
6 Hb_011972_010 0.3175275846 - - conserved hypothetical protein [Ricinus communis]
7 Hb_011505_010 0.3270006842 - - -
8 Hb_001226_010 0.3301415446 transcription factor TF Family: RWP-RK conserved hypothetical protein [Ricinus communis]
9 Hb_001214_150 0.3326988575 - - PREDICTED: uncharacterized protein LOC102624288 [Citrus sinensis]
10 Hb_007145_010 0.3398422689 - - ammonium transporter 3.1-like protein [Camellia sinensis]
11 Hb_001322_030 0.3448344118 - - triacylglycerol lipase, putative [Ricinus communis]
12 Hb_010812_020 0.3466145799 transcription factor TF Family: IWS1 transcription elongation factor s-II, putative [Ricinus communis]
13 Hb_000392_460 0.3502290809 - - Pectate lyase precursor, putative [Ricinus communis]
14 Hb_001470_070 0.3517541609 - - metal ion binding protein, putative [Ricinus communis]
15 Hb_011344_060 0.3521905262 - - PREDICTED: uncharacterized protein LOC105645975 isoform X2 [Jatropha curcas]
16 Hb_000917_170 0.3538328937 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Jatropha curcas]
17 Hb_107429_010 0.3563921221 - - PREDICTED: calcium-dependent protein kinase 34 [Jatropha curcas]
18 Hb_021346_040 0.3581302019 - - hypothetical protein JCGZ_26751 [Jatropha curcas]
19 Hb_003938_030 0.3606848807 transcription factor TF Family: ERF ethylene-responsive transcription factor 2 [Hevea brasiliensis]
20 Hb_001269_460 0.3630577438 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 40 [Jatropha curcas]

Gene co-expression network

sample Hb_026527_040 Hb_026527_040 Hb_001421_050 Hb_001421_050 Hb_026527_040--Hb_001421_050 Hb_000111_400 Hb_000111_400 Hb_026527_040--Hb_000111_400 Hb_006925_090 Hb_006925_090 Hb_026527_040--Hb_006925_090 Hb_034904_010 Hb_034904_010 Hb_026527_040--Hb_034904_010 Hb_011972_010 Hb_011972_010 Hb_026527_040--Hb_011972_010 Hb_011505_010 Hb_011505_010 Hb_026527_040--Hb_011505_010 Hb_129105_010 Hb_129105_010 Hb_001421_050--Hb_129105_010 Hb_004112_060 Hb_004112_060 Hb_001421_050--Hb_004112_060 Hb_002173_010 Hb_002173_010 Hb_001421_050--Hb_002173_010 Hb_164255_010 Hb_164255_010 Hb_001421_050--Hb_164255_010 Hb_001005_160 Hb_001005_160 Hb_001421_050--Hb_001005_160 Hb_004163_020 Hb_004163_020 Hb_000111_400--Hb_004163_020 Hb_000349_190 Hb_000349_190 Hb_000111_400--Hb_000349_190 Hb_004116_120 Hb_004116_120 Hb_000111_400--Hb_004116_120 Hb_004129_080 Hb_004129_080 Hb_000111_400--Hb_004129_080 Hb_001329_170 Hb_001329_170 Hb_000111_400--Hb_001329_170 Hb_006925_090--Hb_011505_010 Hb_000260_150 Hb_000260_150 Hb_006925_090--Hb_000260_150 Hb_104498_030 Hb_104498_030 Hb_006925_090--Hb_104498_030 Hb_171062_010 Hb_171062_010 Hb_006925_090--Hb_171062_010 Hb_002284_110 Hb_002284_110 Hb_006925_090--Hb_002284_110 Hb_001226_010 Hb_001226_010 Hb_034904_010--Hb_001226_010 Hb_001322_030 Hb_001322_030 Hb_034904_010--Hb_001322_030 Hb_001470_070 Hb_001470_070 Hb_034904_010--Hb_001470_070 Hb_007145_010 Hb_007145_010 Hb_034904_010--Hb_007145_010 Hb_001143_150 Hb_001143_150 Hb_034904_010--Hb_001143_150 Hb_005144_190 Hb_005144_190 Hb_034904_010--Hb_005144_190 Hb_011972_010--Hb_001322_030 Hb_011972_010--Hb_007145_010 Hb_000352_200 Hb_000352_200 Hb_011972_010--Hb_000352_200 Hb_011972_010--Hb_001470_070 Hb_002675_200 Hb_002675_200 Hb_011972_010--Hb_002675_200 Hb_001269_460 Hb_001269_460 Hb_011972_010--Hb_001269_460 Hb_011505_010--Hb_000260_150 Hb_001195_430 Hb_001195_430 Hb_011505_010--Hb_001195_430 Hb_000392_460 Hb_000392_460 Hb_011505_010--Hb_000392_460 Hb_011505_010--Hb_104498_030 Hb_011174_030 Hb_011174_030 Hb_011505_010--Hb_011174_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.137967 0.56834 0.119979 0.101604 0.0837425
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.64675 0 0.0381442 0

CAGE analysis