Hb_025964_050

Information

Type -
Description -
Location Contig25964: 41401-48043
Sequence    

Annotation

kegg
ID rcu:RCOM_1615090
description hypothetical protein
nr
ID XP_012083412.1
description PREDICTED: neural Wiskott-Aldrich syndrome protein [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JXM2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14413 PE=4 SV=1
Gene Ontology
ID GO:0047044
description secoisolariciresinol dehydrogenase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_025964_050 0.0 - - PREDICTED: neural Wiskott-Aldrich syndrome protein [Jatropha curcas]
2 Hb_000169_140 0.2155735666 - - PREDICTED: uncharacterized protein LOC105643397 [Jatropha curcas]
3 Hb_000529_220 0.2165170029 - - conserved hypothetical protein [Ricinus communis]
4 Hb_007520_010 0.2209781436 - - PREDICTED: uncharacterized protein LOC105640383 [Jatropha curcas]
5 Hb_000539_030 0.2214836705 rubber biosynthesis Gene Name: Mevalonate diphosphate decarboxylase diphosphomevelonate decarboxylase [Hevea brasiliensis]
6 Hb_004218_210 0.2217844192 transcription factor TF Family: Orphans hypothetical protein JCGZ_24525 [Jatropha curcas]
7 Hb_000575_020 0.2225289908 - - PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Jatropha curcas]
8 Hb_104010_010 0.2256232495 - - hypothetical protein JCGZ_26423 [Jatropha curcas]
9 Hb_004162_260 0.2291607227 transcription factor TF Family: C2H2 conserved hypothetical protein [Ricinus communis]
10 Hb_002843_080 0.2295485452 - - SAUR family protein [Theobroma cacao]
11 Hb_004108_090 0.2297983972 - - PREDICTED: uncharacterized protein LOC105650231 [Jatropha curcas]
12 Hb_162275_030 0.2331127904 - - PREDICTED: uncharacterized protein LOC105646638 [Jatropha curcas]
13 Hb_002260_030 0.2340015998 - - PREDICTED: putative glutamine amidotransferase YLR126C [Jatropha curcas]
14 Hb_000920_150 0.2351887155 - - annexin [Manihot esculenta]
15 Hb_000099_130 0.2362442355 - - PREDICTED: uncharacterized protein LOC105645728 [Jatropha curcas]
16 Hb_011004_010 0.2385139965 - - Mitochondrial carnitine/acylcarnitine carrier protein, putative [Ricinus communis]
17 Hb_000907_090 0.243043592 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
18 Hb_010402_050 0.2437290123 - - -
19 Hb_001507_070 0.2446509937 - - conserved hypothetical protein [Ricinus communis]
20 Hb_008948_100 0.2447955282 - - PREDICTED: SPX domain-containing protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_025964_050 Hb_025964_050 Hb_000169_140 Hb_000169_140 Hb_025964_050--Hb_000169_140 Hb_000529_220 Hb_000529_220 Hb_025964_050--Hb_000529_220 Hb_007520_010 Hb_007520_010 Hb_025964_050--Hb_007520_010 Hb_000539_030 Hb_000539_030 Hb_025964_050--Hb_000539_030 Hb_004218_210 Hb_004218_210 Hb_025964_050--Hb_004218_210 Hb_000575_020 Hb_000575_020 Hb_025964_050--Hb_000575_020 Hb_000210_220 Hb_000210_220 Hb_000169_140--Hb_000210_220 Hb_003349_080 Hb_003349_080 Hb_000169_140--Hb_003349_080 Hb_000169_140--Hb_000529_220 Hb_000997_360 Hb_000997_360 Hb_000169_140--Hb_000997_360 Hb_028487_030 Hb_028487_030 Hb_000169_140--Hb_028487_030 Hb_002260_030 Hb_002260_030 Hb_000169_140--Hb_002260_030 Hb_000272_140 Hb_000272_140 Hb_000529_220--Hb_000272_140 Hb_000672_120 Hb_000672_120 Hb_000529_220--Hb_000672_120 Hb_008544_010 Hb_008544_010 Hb_000529_220--Hb_008544_010 Hb_162275_030 Hb_162275_030 Hb_000529_220--Hb_162275_030 Hb_000329_180 Hb_000329_180 Hb_000529_220--Hb_000329_180 Hb_000258_100 Hb_000258_100 Hb_007520_010--Hb_000258_100 Hb_007520_010--Hb_000169_140 Hb_003336_030 Hb_003336_030 Hb_007520_010--Hb_003336_030 Hb_004108_090 Hb_004108_090 Hb_007520_010--Hb_004108_090 Hb_004162_260 Hb_004162_260 Hb_007520_010--Hb_004162_260 Hb_010582_010 Hb_010582_010 Hb_007520_010--Hb_010582_010 Hb_001587_070 Hb_001587_070 Hb_000539_030--Hb_001587_070 Hb_000539_030--Hb_162275_030 Hb_012423_050 Hb_012423_050 Hb_000539_030--Hb_012423_050 Hb_001006_180 Hb_001006_180 Hb_000539_030--Hb_001006_180 Hb_004738_010 Hb_004738_010 Hb_000539_030--Hb_004738_010 Hb_000907_090 Hb_000907_090 Hb_000539_030--Hb_000907_090 Hb_000613_160 Hb_000613_160 Hb_004218_210--Hb_000613_160 Hb_000453_300 Hb_000453_300 Hb_004218_210--Hb_000453_300 Hb_004218_210--Hb_000575_020 Hb_088538_010 Hb_088538_010 Hb_004218_210--Hb_088538_010 Hb_001507_070 Hb_001507_070 Hb_004218_210--Hb_001507_070 Hb_011004_010 Hb_011004_010 Hb_004218_210--Hb_011004_010 Hb_000575_020--Hb_011004_010 Hb_000575_020--Hb_004108_090 Hb_000032_040 Hb_000032_040 Hb_000575_020--Hb_000032_040 Hb_000575_020--Hb_001507_070 Hb_000742_270 Hb_000742_270 Hb_000575_020--Hb_000742_270 Hb_000012_130 Hb_000012_130 Hb_000575_020--Hb_000012_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.136435 0.050341 0 0.187212 0.0255898 0.0643443
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.752429 0.345144 0.448149 0 0.199015

CAGE analysis