Hb_004738_010

Information

Type -
Description -
Location Contig4738: 11183-18368
Sequence    

Annotation

kegg
ID pop:POPTR_0014s14040g
description POPTRDRAFT_1099521; hypothetical protein
nr
ID XP_012072706.1
description PREDICTED: N-acetyl-D-glucosamine kinase-like [Jatropha curcas]
swissprot
ID Q54PM7
description N-acetyl-D-glucosamine kinase OS=Dictyostelium discoideum GN=nagk PE=3 SV=2
trembl
ID A0A067KRZ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05213 PE=4 SV=1
Gene Ontology
ID GO:0016301
description n-acetyl-d-glucosamine kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44458: 11252-18247
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004738_010 0.0 - - PREDICTED: N-acetyl-D-glucosamine kinase-like [Jatropha curcas]
2 Hb_002119_120 0.0655698606 - - PREDICTED: anthranilate synthase beta subunit 1, chloroplastic-like [Jatropha curcas]
3 Hb_001863_480 0.0797434384 - - PREDICTED: uncharacterized protein LOC105630612 [Jatropha curcas]
4 Hb_000907_090 0.0964812509 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
5 Hb_001439_170 0.099568417 - - PREDICTED: pectinesterase 31-like isoform X2 [Jatropha curcas]
6 Hb_001711_030 0.1022581081 - - PREDICTED: uncharacterized protein LOC105642409 [Jatropha curcas]
7 Hb_000032_040 0.1032605774 - - PREDICTED: mitochondrial adenine nucleotide transporter ADNT1 [Jatropha curcas]
8 Hb_001035_040 0.1119127214 - - unnamed protein product [Coffea canephora]
9 Hb_162275_030 0.112739505 - - PREDICTED: uncharacterized protein LOC105646638 [Jatropha curcas]
10 Hb_007140_020 0.1129640067 - - hypothetical protein CICLE_v10008419mg [Citrus clementina]
11 Hb_002600_100 0.1141672426 - - PREDICTED: putative endo-1,3(4)-beta-glucanase 2 [Jatropha curcas]
12 Hb_001437_220 0.1177772787 - - Transmembrane protein, putative [Ricinus communis]
13 Hb_003038_180 0.1198822031 - - PREDICTED: uncharacterized protein LOC105649131 [Jatropha curcas]
14 Hb_002735_060 0.1200979618 - - PREDICTED: desumoylating isopeptidase 1 [Jatropha curcas]
15 Hb_001762_060 0.1213383265 - - pantothenate kinase, putative [Ricinus communis]
16 Hb_000012_130 0.1243927283 - - PREDICTED: uncharacterized protein LOC100807540 isoform X2 [Glycine max]
17 Hb_001006_180 0.1257776013 - - PREDICTED: endonuclease V-like [Jatropha curcas]
18 Hb_000487_310 0.1273914673 - - PREDICTED: uncharacterized protein LOC105646211 isoform X1 [Jatropha curcas]
19 Hb_171554_080 0.1278337057 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
20 Hb_002539_080 0.128471568 - - PREDICTED: triose phosphate/phosphate translocator, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_004738_010 Hb_004738_010 Hb_002119_120 Hb_002119_120 Hb_004738_010--Hb_002119_120 Hb_001863_480 Hb_001863_480 Hb_004738_010--Hb_001863_480 Hb_000907_090 Hb_000907_090 Hb_004738_010--Hb_000907_090 Hb_001439_170 Hb_001439_170 Hb_004738_010--Hb_001439_170 Hb_001711_030 Hb_001711_030 Hb_004738_010--Hb_001711_030 Hb_000032_040 Hb_000032_040 Hb_004738_010--Hb_000032_040 Hb_002119_120--Hb_001439_170 Hb_002119_120--Hb_001863_480 Hb_000487_310 Hb_000487_310 Hb_002119_120--Hb_000487_310 Hb_002119_120--Hb_001711_030 Hb_001437_220 Hb_001437_220 Hb_002119_120--Hb_001437_220 Hb_001863_480--Hb_001711_030 Hb_003408_020 Hb_003408_020 Hb_001863_480--Hb_003408_020 Hb_001863_480--Hb_001439_170 Hb_171554_080 Hb_171554_080 Hb_001863_480--Hb_171554_080 Hb_002539_080 Hb_002539_080 Hb_001863_480--Hb_002539_080 Hb_004994_260 Hb_004994_260 Hb_000907_090--Hb_004994_260 Hb_002214_050 Hb_002214_050 Hb_000907_090--Hb_002214_050 Hb_162275_030 Hb_162275_030 Hb_000907_090--Hb_162275_030 Hb_010344_040 Hb_010344_040 Hb_000907_090--Hb_010344_040 Hb_002735_060 Hb_002735_060 Hb_000907_090--Hb_002735_060 Hb_000012_130 Hb_000012_130 Hb_001439_170--Hb_000012_130 Hb_001439_170--Hb_001711_030 Hb_044662_070 Hb_044662_070 Hb_001439_170--Hb_044662_070 Hb_001439_170--Hb_002539_080 Hb_000051_040 Hb_000051_040 Hb_001711_030--Hb_000051_040 Hb_012522_030 Hb_012522_030 Hb_001711_030--Hb_012522_030 Hb_002527_070 Hb_002527_070 Hb_001711_030--Hb_002527_070 Hb_000922_270 Hb_000922_270 Hb_001711_030--Hb_000922_270 Hb_011004_010 Hb_011004_010 Hb_000032_040--Hb_011004_010 Hb_001762_060 Hb_001762_060 Hb_000032_040--Hb_001762_060 Hb_001006_180 Hb_001006_180 Hb_000032_040--Hb_001006_180 Hb_000742_270 Hb_000742_270 Hb_000032_040--Hb_000742_270 Hb_000032_040--Hb_002119_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
31.2118 3.04253 4.96832 10.4785 11.2761 18.4098
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
77.9424 37.6725 44.0093 8.54523 9.62586

CAGE analysis