Hb_044662_070

Information

Type -
Description -
Location Contig44662: 52061-58340
Sequence    

Annotation

kegg
ID rcu:RCOM_1032270
description heat shock protein 70 (HSP70)-interacting protein, putative
nr
ID XP_012078232.1
description PREDICTED: hsp70-Hsp90 organizing protein 3 [Jatropha curcas]
swissprot
ID Q8VD33
description Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus GN=Sgtb PE=2 SV=1
trembl
ID A0A067K9A4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12088 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43085: 52167-58371
cDNA
(Sanger)
(ID:Location)		 010_D16.ab1: 56132-58371 , 013_A02.ab1: 56391-58371

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_044662_070 0.0 - - PREDICTED: hsp70-Hsp90 organizing protein 3 [Jatropha curcas]
2 Hb_023386_080 0.0676449598 - - PREDICTED: peroxisome biogenesis protein 19-2-like [Jatropha curcas]
3 Hb_004108_230 0.0679982264 - - PREDICTED: 6.7 kDa chloroplast outer envelope membrane protein-like [Jatropha curcas]
4 Hb_007924_020 0.0718669636 - - PREDICTED: chaperonin CPN60-like 2, mitochondrial isoform X2 [Jatropha curcas]
5 Hb_003175_040 0.0809852899 - - PREDICTED: katanin p60 ATPase-containing subunit A1 isoform X1 [Jatropha curcas]
6 Hb_003408_020 0.0824162393 - - hypothetical protein RCOM_0453040 [Ricinus communis]
7 Hb_003376_120 0.0859891739 - - PREDICTED: cell number regulator 8 [Jatropha curcas]
8 Hb_001711_030 0.0864110101 - - PREDICTED: uncharacterized protein LOC105642409 [Jatropha curcas]
9 Hb_001257_080 0.0865549136 - - conserved hypothetical protein [Ricinus communis]
10 Hb_153112_020 0.0867947485 - - PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like [Jatropha curcas]
11 Hb_011794_070 0.0884115054 - - PREDICTED: 60S ribosomal protein L36-2-like [Jatropha curcas]
12 Hb_011224_110 0.0897807771 - - Pre-mRNA-splicing factor cwc15, putative [Ricinus communis]
13 Hb_000627_120 0.0905082947 - - PREDICTED: probable adenylate kinase 7, mitochondrial [Jatropha curcas]
14 Hb_002918_200 0.0910979965 - - -
15 Hb_001439_170 0.0915378939 - - PREDICTED: pectinesterase 31-like isoform X2 [Jatropha curcas]
16 Hb_000634_100 0.0916004353 - - hypothetical protein PRUPE_ppa013350mg [Prunus persica]
17 Hb_001912_010 0.0919172552 - - PREDICTED: uncharacterized protein LOC105636600 [Jatropha curcas]
18 Hb_007479_020 0.0924268494 - - PREDICTED: CMP-sialic acid transporter 5 [Jatropha curcas]
19 Hb_002527_070 0.0925351175 - - axonemal dynein light chain, putative [Ricinus communis]
20 Hb_000146_020 0.0926824985 - - PREDICTED: protein TIC 21, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_044662_070 Hb_044662_070 Hb_023386_080 Hb_023386_080 Hb_044662_070--Hb_023386_080 Hb_004108_230 Hb_004108_230 Hb_044662_070--Hb_004108_230 Hb_007924_020 Hb_007924_020 Hb_044662_070--Hb_007924_020 Hb_003175_040 Hb_003175_040 Hb_044662_070--Hb_003175_040 Hb_003408_020 Hb_003408_020 Hb_044662_070--Hb_003408_020 Hb_003376_120 Hb_003376_120 Hb_044662_070--Hb_003376_120 Hb_002603_100 Hb_002603_100 Hb_023386_080--Hb_002603_100 Hb_000329_040 Hb_000329_040 Hb_023386_080--Hb_000329_040 Hb_000634_100 Hb_000634_100 Hb_023386_080--Hb_000634_100 Hb_000956_010 Hb_000956_010 Hb_023386_080--Hb_000956_010 Hb_000376_050 Hb_000376_050 Hb_023386_080--Hb_000376_050 Hb_002918_200 Hb_002918_200 Hb_004108_230--Hb_002918_200 Hb_000120_750 Hb_000120_750 Hb_004108_230--Hb_000120_750 Hb_004108_230--Hb_003175_040 Hb_004837_140 Hb_004837_140 Hb_004108_230--Hb_004837_140 Hb_011794_070 Hb_011794_070 Hb_004108_230--Hb_011794_070 Hb_000622_040 Hb_000622_040 Hb_007924_020--Hb_000622_040 Hb_008289_060 Hb_008289_060 Hb_007924_020--Hb_008289_060 Hb_000429_170 Hb_000429_170 Hb_007924_020--Hb_000429_170 Hb_003408_030 Hb_003408_030 Hb_007924_020--Hb_003408_030 Hb_007924_020--Hb_003376_120 Hb_003175_040--Hb_003408_020 Hb_003175_040--Hb_002918_200 Hb_003175_040--Hb_004837_140 Hb_001691_210 Hb_001691_210 Hb_003175_040--Hb_001691_210 Hb_002716_070 Hb_002716_070 Hb_003175_040--Hb_002716_070 Hb_000922_270 Hb_000922_270 Hb_003408_020--Hb_000922_270 Hb_000220_050 Hb_000220_050 Hb_003408_020--Hb_000220_050 Hb_001863_480 Hb_001863_480 Hb_003408_020--Hb_001863_480 Hb_002527_070 Hb_002527_070 Hb_003408_020--Hb_002527_070 Hb_003376_120--Hb_000634_100 Hb_003376_120--Hb_003408_030 Hb_003376_120--Hb_023386_080 Hb_000627_120 Hb_000627_120 Hb_003376_120--Hb_000627_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
58.1996 14.5092 25.0711 17.0269 43.9748 42.3069
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
99.2522 81.4227 83.5454 18.6982 12.7952

CAGE analysis