Hb_000032_040

Information

Type -
Description -
Location Contig32: 32729-36916
Sequence    

Annotation

kegg
ID pop:POPTR_0001s10370g
description POPTRDRAFT_640384; hypothetical protein
nr
ID XP_012086759.1
description PREDICTED: mitochondrial adenine nucleotide transporter ADNT1 [Jatropha curcas]
swissprot
ID O04619
description Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana GN=ADNT1 PE=2 SV=1
trembl
ID A0A067JMX0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20482 PE=3 SV=1
Gene Ontology
ID GO:0055085
description mitochondrial adenine nucleotide transporter adnt1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33685: 32725-32824 , PASA_asmbl_33686: 32845-36745
cDNA
(Sanger)
(ID:Location)		 034_M01.ab1: 32725-32824

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_040 0.0 - - PREDICTED: mitochondrial adenine nucleotide transporter ADNT1 [Jatropha curcas]
2 Hb_011004_010 0.083708911 - - Mitochondrial carnitine/acylcarnitine carrier protein, putative [Ricinus communis]
3 Hb_001762_060 0.0897046242 - - pantothenate kinase, putative [Ricinus communis]
4 Hb_001006_180 0.0945851877 - - PREDICTED: endonuclease V-like [Jatropha curcas]
5 Hb_000742_270 0.0986131715 - - PREDICTED: fatty acid 2-hydroxylase 1-like [Jatropha curcas]
6 Hb_004738_010 0.1032605774 - - PREDICTED: N-acetyl-D-glucosamine kinase-like [Jatropha curcas]
7 Hb_002119_120 0.1127771829 - - PREDICTED: anthranilate synthase beta subunit 1, chloroplastic-like [Jatropha curcas]
8 Hb_001268_080 0.1134069912 - - catalytic, putative [Ricinus communis]
9 Hb_006831_030 0.1139235599 - - PREDICTED: ras-related protein RABB1c [Fragaria vesca subsp. vesca]
10 Hb_024714_060 0.113927307 - - PREDICTED: thiamine pyrophosphokinase 1 isoform X1 [Jatropha curcas]
11 Hb_148121_010 0.1207963564 - - conserved hypothetical protein [Ricinus communis]
12 Hb_009265_060 0.1215793497 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
13 Hb_001507_070 0.121584427 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000069_100 0.1236251509 - - conserved hypothetical protein [Ricinus communis]
15 Hb_012423_050 0.1262398937 - - PREDICTED: transmembrane protein 64 [Jatropha curcas]
16 Hb_000398_160 0.1265077101 - - GDP-mannose transporter, putative [Ricinus communis]
17 Hb_001278_050 0.127152976 - - PREDICTED: uncharacterized protein LOC105636924 [Jatropha curcas]
18 Hb_162275_030 0.1280545987 - - PREDICTED: uncharacterized protein LOC105646638 [Jatropha curcas]
19 Hb_001213_120 0.1300924787 - - PREDICTED: immediate early response 3-interacting protein 1-like [Brassica rapa]
20 Hb_000270_410 0.1326375021 - - -

Gene co-expression network

sample Hb_000032_040 Hb_000032_040 Hb_011004_010 Hb_011004_010 Hb_000032_040--Hb_011004_010 Hb_001762_060 Hb_001762_060 Hb_000032_040--Hb_001762_060 Hb_001006_180 Hb_001006_180 Hb_000032_040--Hb_001006_180 Hb_000742_270 Hb_000742_270 Hb_000032_040--Hb_000742_270 Hb_004738_010 Hb_004738_010 Hb_000032_040--Hb_004738_010 Hb_002119_120 Hb_002119_120 Hb_000032_040--Hb_002119_120 Hb_001507_070 Hb_001507_070 Hb_011004_010--Hb_001507_070 Hb_000575_020 Hb_000575_020 Hb_011004_010--Hb_000575_020 Hb_011004_010--Hb_000742_270 Hb_003371_100 Hb_003371_100 Hb_011004_010--Hb_003371_100 Hb_000175_610 Hb_000175_610 Hb_011004_010--Hb_000175_610 Hb_001762_060--Hb_001006_180 Hb_000069_100 Hb_000069_100 Hb_001762_060--Hb_000069_100 Hb_024714_060 Hb_024714_060 Hb_001762_060--Hb_024714_060 Hb_012423_050 Hb_012423_050 Hb_001762_060--Hb_012423_050 Hb_000398_160 Hb_000398_160 Hb_001762_060--Hb_000398_160 Hb_001006_180--Hb_024714_060 Hb_001006_180--Hb_012423_050 Hb_006831_030 Hb_006831_030 Hb_001006_180--Hb_006831_030 Hb_001006_180--Hb_000398_160 Hb_162275_030 Hb_162275_030 Hb_001006_180--Hb_162275_030 Hb_000742_270--Hb_001507_070 Hb_148121_010 Hb_148121_010 Hb_000742_270--Hb_148121_010 Hb_001268_080 Hb_001268_080 Hb_000742_270--Hb_001268_080 Hb_000742_270--Hb_024714_060 Hb_004738_010--Hb_002119_120 Hb_001863_480 Hb_001863_480 Hb_004738_010--Hb_001863_480 Hb_000907_090 Hb_000907_090 Hb_004738_010--Hb_000907_090 Hb_001439_170 Hb_001439_170 Hb_004738_010--Hb_001439_170 Hb_001711_030 Hb_001711_030 Hb_004738_010--Hb_001711_030 Hb_002119_120--Hb_001439_170 Hb_002119_120--Hb_001863_480 Hb_000487_310 Hb_000487_310 Hb_002119_120--Hb_000487_310 Hb_002119_120--Hb_001711_030 Hb_001437_220 Hb_001437_220 Hb_002119_120--Hb_001437_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
81.5288 6.38178 9.4217 22.1525 31.0151 60.2709
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
270.862 174.636 207.274 31.0993 26.1389

CAGE analysis