Hb_011457_020

Information

Type -
Description -
Location Contig11457: 5412-5678
Sequence    

Annotation

kegg
ID vvi:100853829
description uncharacterized LOC100853829
nr
ID XP_012092199.1
description PREDICTED: uncharacterized protein LOC105649960 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JC84
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21893 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011457_020 0.0 - - PREDICTED: uncharacterized protein LOC105649960 [Jatropha curcas]
2 Hb_021888_090 0.2480854903 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 isoform X1 [Malus domestica]
3 Hb_082730_010 0.266366693 - - PREDICTED: uncharacterized protein LOC104221396 [Nicotiana sylvestris]
4 Hb_148891_010 0.2873053639 - - -
5 Hb_000713_020 0.3059771153 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
6 Hb_011242_030 0.3087212171 - - -
7 Hb_003020_080 0.3107273589 - - -
8 Hb_001366_080 0.3192786874 transcription factor TF Family: NAC NAC transcription factor 068 [Jatropha curcas]
9 Hb_084889_010 0.3305323405 - - PREDICTED: uncharacterized protein LOC105638918 [Jatropha curcas]
10 Hb_004102_030 0.3357731433 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
11 Hb_002180_010 0.3361883304 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
12 Hb_001495_060 0.3376128046 - - PREDICTED: probable aldo-keto reductase 1 [Jatropha curcas]
13 Hb_109268_010 0.3431758034 - - PREDICTED: uncharacterized protein LOC105650977 [Jatropha curcas]
14 Hb_001022_060 0.3451739689 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
15 Hb_007101_010 0.3457669656 - - PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Jatropha curcas]
16 Hb_128051_010 0.3458216532 - - -
17 Hb_004931_010 0.3515414164 - - inosine triphosphate pyrophosphatase, putative [Ricinus communis]
18 Hb_096224_020 0.3589369508 - - hypothetical protein JCGZ_06980 [Jatropha curcas]
19 Hb_000179_150 0.3593187302 - - hypothetical protein ZEAMMB73_153699 [Zea mays]
20 Hb_002685_180 0.3604636939 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_011457_020 Hb_011457_020 Hb_021888_090 Hb_021888_090 Hb_011457_020--Hb_021888_090 Hb_082730_010 Hb_082730_010 Hb_011457_020--Hb_082730_010 Hb_148891_010 Hb_148891_010 Hb_011457_020--Hb_148891_010 Hb_000713_020 Hb_000713_020 Hb_011457_020--Hb_000713_020 Hb_011242_030 Hb_011242_030 Hb_011457_020--Hb_011242_030 Hb_003020_080 Hb_003020_080 Hb_011457_020--Hb_003020_080 Hb_001341_110 Hb_001341_110 Hb_021888_090--Hb_001341_110 Hb_117240_010 Hb_117240_010 Hb_021888_090--Hb_117240_010 Hb_002180_010 Hb_002180_010 Hb_021888_090--Hb_002180_010 Hb_003209_050 Hb_003209_050 Hb_021888_090--Hb_003209_050 Hb_000829_080 Hb_000829_080 Hb_021888_090--Hb_000829_080 Hb_002240_080 Hb_002240_080 Hb_082730_010--Hb_002240_080 Hb_094245_010 Hb_094245_010 Hb_082730_010--Hb_094245_010 Hb_004297_060 Hb_004297_060 Hb_082730_010--Hb_004297_060 Hb_148908_020 Hb_148908_020 Hb_082730_010--Hb_148908_020 Hb_082730_010--Hb_002180_010 Hb_000445_190 Hb_000445_190 Hb_148891_010--Hb_000445_190 Hb_004102_030 Hb_004102_030 Hb_148891_010--Hb_004102_030 Hb_001017_080 Hb_001017_080 Hb_148891_010--Hb_001017_080 Hb_004931_010 Hb_004931_010 Hb_148891_010--Hb_004931_010 Hb_000803_040 Hb_000803_040 Hb_148891_010--Hb_000803_040 Hb_001495_060 Hb_001495_060 Hb_148891_010--Hb_001495_060 Hb_000179_150 Hb_000179_150 Hb_000713_020--Hb_000179_150 Hb_000189_360 Hb_000189_360 Hb_000713_020--Hb_000189_360 Hb_133311_010 Hb_133311_010 Hb_000713_020--Hb_133311_010 Hb_084889_010 Hb_084889_010 Hb_000713_020--Hb_084889_010 Hb_000713_020--Hb_011242_030 Hb_114839_010 Hb_114839_010 Hb_000713_020--Hb_114839_010 Hb_002685_180 Hb_002685_180 Hb_011242_030--Hb_002685_180 Hb_019033_010 Hb_019033_010 Hb_011242_030--Hb_019033_010 Hb_000453_210 Hb_000453_210 Hb_011242_030--Hb_000453_210 Hb_001437_050 Hb_001437_050 Hb_011242_030--Hb_001437_050 Hb_000275_130 Hb_000275_130 Hb_011242_030--Hb_000275_130 Hb_011242_030--Hb_001495_060 Hb_003322_010 Hb_003322_010 Hb_003020_080--Hb_003322_010 Hb_096224_020 Hb_096224_020 Hb_003020_080--Hb_096224_020 Hb_002282_040 Hb_002282_040 Hb_003020_080--Hb_002282_040 Hb_003020_080--Hb_004931_010 Hb_004931_080 Hb_004931_080 Hb_003020_080--Hb_004931_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.872805 0.524155 0.464574 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.79882 0.719176 0 0.338225 0

CAGE analysis