Hb_010743_010

Information

Type transcription factor
Description TF Family: NAC
Location Contig10743: 2561-5950
Sequence    

Annotation

kegg
ID rcu:RCOM_0766230
description transcription factor, putative
nr
ID XP_002527580.1
description transcription factor, putative [Ricinus communis]
swissprot
ID Q9FFI5
description NAC domain-containing protein 86 OS=Arabidopsis thaliana GN=NAC086 PE=2 SV=1
trembl
ID B9SNL1
description Transcription factor, putative OS=Ricinus communis GN=RCOM_0766230 PE=4 SV=1
Gene Ontology
ID GO:0003677
description nac transcription factor 29-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010743_010 0.0 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
2 Hb_137222_010 0.1148649494 - - PREDICTED: hippocampus abundant transcript-like protein 1 [Jatropha curcas]
3 Hb_012655_010 0.1254088674 - - hypothetical protein JCGZ_09061 [Jatropha curcas]
4 Hb_004204_060 0.1269423043 transcription factor TF Family: NAC NAC transcription factor 058, partial [Jatropha curcas]
5 Hb_001409_080 0.1316955452 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Populus euphratica]
6 Hb_001491_070 0.1323403144 - - PREDICTED: probable beta-1,3-galactosyltransferase 17 isoform X1 [Jatropha curcas]
7 Hb_162174_010 0.1324854342 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
8 Hb_011618_010 0.1336971801 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
9 Hb_005018_010 0.135312169 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
10 Hb_041139_010 0.1363088681 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
11 Hb_127263_010 0.1372727631 - - hypothetical protein JCGZ_02828 [Jatropha curcas]
12 Hb_002001_030 0.1375847591 - - Plasma membrane ATPase 4 [Gossypium arboreum]
13 Hb_176680_010 0.1385009915 - - hypothetical protein JCGZ_22787 [Jatropha curcas]
14 Hb_172426_070 0.1392554539 - - PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]
15 Hb_001384_040 0.1421941023 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
16 Hb_005731_010 0.1441450134 - - hypothetical protein VITISV_030941 [Vitis vinifera]
17 Hb_003163_010 0.1471062155 - - hypothetical protein POPTR_0012s02920g [Populus trichocarpa]
18 Hb_029920_010 0.1484101422 - - pepsin A, putative [Ricinus communis]
19 Hb_000816_240 0.1490158557 - - PREDICTED: phosphoglucan phosphatase LSF2, chloroplastic [Jatropha curcas]
20 Hb_000941_110 0.149829443 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]

Gene co-expression network

sample Hb_010743_010 Hb_010743_010 Hb_137222_010 Hb_137222_010 Hb_010743_010--Hb_137222_010 Hb_012655_010 Hb_012655_010 Hb_010743_010--Hb_012655_010 Hb_004204_060 Hb_004204_060 Hb_010743_010--Hb_004204_060 Hb_001409_080 Hb_001409_080 Hb_010743_010--Hb_001409_080 Hb_001491_070 Hb_001491_070 Hb_010743_010--Hb_001491_070 Hb_162174_010 Hb_162174_010 Hb_010743_010--Hb_162174_010 Hb_000816_240 Hb_000816_240 Hb_137222_010--Hb_000816_240 Hb_029920_010 Hb_029920_010 Hb_137222_010--Hb_029920_010 Hb_000300_110 Hb_000300_110 Hb_137222_010--Hb_000300_110 Hb_000424_130 Hb_000424_130 Hb_137222_010--Hb_000424_130 Hb_000327_260 Hb_000327_260 Hb_137222_010--Hb_000327_260 Hb_127263_010 Hb_127263_010 Hb_137222_010--Hb_127263_010 Hb_005731_010 Hb_005731_010 Hb_012655_010--Hb_005731_010 Hb_004076_060 Hb_004076_060 Hb_012655_010--Hb_004076_060 Hb_000941_110 Hb_000941_110 Hb_012655_010--Hb_000941_110 Hb_017043_040 Hb_017043_040 Hb_012655_010--Hb_017043_040 Hb_000109_140 Hb_000109_140 Hb_012655_010--Hb_000109_140 Hb_012655_010--Hb_004204_060 Hb_007850_020 Hb_007850_020 Hb_004204_060--Hb_007850_020 Hb_000985_160 Hb_000985_160 Hb_004204_060--Hb_000985_160 Hb_012035_010 Hb_012035_010 Hb_004204_060--Hb_012035_010 Hb_000152_350 Hb_000152_350 Hb_004204_060--Hb_000152_350 Hb_002078_330 Hb_002078_330 Hb_004204_060--Hb_002078_330 Hb_001409_080--Hb_127263_010 Hb_000866_060 Hb_000866_060 Hb_001409_080--Hb_000866_060 Hb_176680_010 Hb_176680_010 Hb_001409_080--Hb_176680_010 Hb_000239_050 Hb_000239_050 Hb_001409_080--Hb_000239_050 Hb_006938_060 Hb_006938_060 Hb_001409_080--Hb_006938_060 Hb_002762_050 Hb_002762_050 Hb_001409_080--Hb_002762_050 Hb_172426_070 Hb_172426_070 Hb_001491_070--Hb_172426_070 Hb_005018_010 Hb_005018_010 Hb_001491_070--Hb_005018_010 Hb_003163_010 Hb_003163_010 Hb_001491_070--Hb_003163_010 Hb_002001_030 Hb_002001_030 Hb_001491_070--Hb_002001_030 Hb_001491_070--Hb_000424_130 Hb_000139_360 Hb_000139_360 Hb_001491_070--Hb_000139_360 Hb_162174_010--Hb_017043_040 Hb_162174_010--Hb_012655_010 Hb_004881_070 Hb_004881_070 Hb_162174_010--Hb_004881_070 Hb_162174_010--Hb_005731_010 Hb_000621_030 Hb_000621_030 Hb_162174_010--Hb_000621_030 Hb_162174_010--Hb_005018_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.337038 0.241538 0 0.0184796
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0607228 0.465217

CAGE analysis