Hb_007765_010

Information

Type -
Description -
Location Contig7765: 9825-10313
Sequence    

Annotation

kegg
ID rcu:RCOM_0731140
description hypothetical protein
nr
ID XP_002520449.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S380
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0731140 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007765_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000866_420 0.1443512086 - - Remorin, putative [Ricinus communis]
3 Hb_000429_250 0.1586277333 - - hypothetical protein L484_000744 [Morus notabilis]
4 Hb_087762_010 0.1748651753 - - thioredoxin-like family protein [Hevea brasiliensis]
5 Hb_088065_010 0.1757220373 - - hypothetical protein glysoja_007934 [Glycine soja]
6 Hb_000035_130 0.1777673245 - - hypothetical protein Csa_4G652025 [Cucumis sativus]
7 Hb_005965_010 0.1807645337 transcription factor TF Family: MYB-related PREDICTED: myb family transcription factor APL-like [Jatropha curcas]
8 Hb_073339_010 0.1854614993 - - hypothetical protein 30 [Hevea brasiliensis]
9 Hb_006723_020 0.1858416129 - - ARF2-B: ADP-ribosylation factor 2-B [Gossypium arboreum]
10 Hb_128998_010 0.187723634 - - PREDICTED: uncharacterized protein LOC105650916 [Jatropha curcas]
11 Hb_140291_010 0.1887800413 - - hypothetical protein JCGZ_17222 [Jatropha curcas]
12 Hb_007777_020 0.1891029332 - - hypothetical protein JCGZ_14410 [Jatropha curcas]
13 Hb_006455_110 0.1902113436 - - bromodomain-containing protein, putative [Ricinus communis]
14 Hb_030328_010 0.1921803651 - - hypothetical protein CICLE_v10015936mg [Citrus clementina]
15 Hb_015354_010 0.1956086277 - - PREDICTED: B2 protein [Jatropha curcas]
16 Hb_143947_010 0.1963414354 - - PREDICTED: deSI-like protein At4g17486 isoform X2 [Pyrus x bretschneideri]
17 Hb_136731_010 0.1995571609 - - PREDICTED: uncharacterized protein LOC105628378 isoform X4 [Jatropha curcas]
18 Hb_032225_020 0.2006978489 - - hypothetical protein POPTR_0006s08140g [Populus trichocarpa]
19 Hb_002253_040 0.2015278591 - - PREDICTED: BTB/POZ domain-containing protein At2g13690 [Jatropha curcas]
20 Hb_003656_140 0.2021900086 - - PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_007765_010 Hb_007765_010 Hb_000866_420 Hb_000866_420 Hb_007765_010--Hb_000866_420 Hb_000429_250 Hb_000429_250 Hb_007765_010--Hb_000429_250 Hb_087762_010 Hb_087762_010 Hb_007765_010--Hb_087762_010 Hb_088065_010 Hb_088065_010 Hb_007765_010--Hb_088065_010 Hb_000035_130 Hb_000035_130 Hb_007765_010--Hb_000035_130 Hb_005965_010 Hb_005965_010 Hb_007765_010--Hb_005965_010 Hb_001575_040 Hb_001575_040 Hb_000866_420--Hb_001575_040 Hb_013405_040 Hb_013405_040 Hb_000866_420--Hb_013405_040 Hb_002475_050 Hb_002475_050 Hb_000866_420--Hb_002475_050 Hb_000606_080 Hb_000606_080 Hb_000866_420--Hb_000606_080 Hb_001673_010 Hb_001673_010 Hb_000866_420--Hb_001673_010 Hb_001623_300 Hb_001623_300 Hb_000429_250--Hb_001623_300 Hb_001623_290 Hb_001623_290 Hb_000429_250--Hb_001623_290 Hb_112047_010 Hb_112047_010 Hb_000429_250--Hb_112047_010 Hb_142751_010 Hb_142751_010 Hb_000429_250--Hb_142751_010 Hb_128998_010 Hb_128998_010 Hb_000429_250--Hb_128998_010 Hb_001767_120 Hb_001767_120 Hb_000429_250--Hb_001767_120 Hb_000891_040 Hb_000891_040 Hb_087762_010--Hb_000891_040 Hb_003297_010 Hb_003297_010 Hb_087762_010--Hb_003297_010 Hb_155375_010 Hb_155375_010 Hb_087762_010--Hb_155375_010 Hb_002157_190 Hb_002157_190 Hb_087762_010--Hb_002157_190 Hb_002253_040 Hb_002253_040 Hb_087762_010--Hb_002253_040 Hb_000523_100 Hb_000523_100 Hb_088065_010--Hb_000523_100 Hb_073559_010 Hb_073559_010 Hb_088065_010--Hb_073559_010 Hb_000248_010 Hb_000248_010 Hb_088065_010--Hb_000248_010 Hb_088774_010 Hb_088774_010 Hb_088065_010--Hb_088774_010 Hb_088065_010--Hb_005965_010 Hb_032225_020 Hb_032225_020 Hb_088065_010--Hb_032225_020 Hb_073339_010 Hb_073339_010 Hb_000035_130--Hb_073339_010 Hb_006723_020 Hb_006723_020 Hb_000035_130--Hb_006723_020 Hb_143947_010 Hb_143947_010 Hb_000035_130--Hb_143947_010 Hb_000035_120 Hb_000035_120 Hb_000035_130--Hb_000035_120 Hb_000538_080 Hb_000538_080 Hb_000035_130--Hb_000538_080 Hb_000878_130 Hb_000878_130 Hb_000035_130--Hb_000878_130 Hb_006455_110 Hb_006455_110 Hb_005965_010--Hb_006455_110 Hb_005965_010--Hb_073339_010 Hb_106005_010 Hb_106005_010 Hb_005965_010--Hb_106005_010 Hb_012807_080 Hb_012807_080 Hb_005965_010--Hb_012807_080 Hb_006455_080 Hb_006455_080 Hb_005965_010--Hb_006455_080 Hb_006455_090 Hb_006455_090 Hb_005965_010--Hb_006455_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.87979 3.76539 4.19472 4.77552 2.81541 25.4776
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.24058 3.60972 3.13562 0.683564 0.813842

CAGE analysis