Hb_073559_010

Information

Type -
Description -
Location Contig73559: 79-554
Sequence    

Annotation

kegg
ID egr:104437848
description probable beta-1,3-galactosyltransferase 12
nr
ID XP_012077286.1
description PREDICTED: probable beta-1,3-galactosyltransferase 12 [Jatropha curcas]
swissprot
ID Q66GS2
description Probable beta-1,3-galactosyltransferase 12 OS=Arabidopsis thaliana GN=B3GALT12 PE=2 SV=1
trembl
ID A0A067KGG3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07669 PE=4 SV=1
Gene Ontology
ID GO:0000139
description probable beta- -galactosyltransferase 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073559_010 0.0 - - PREDICTED: probable beta-1,3-galactosyltransferase 12 [Jatropha curcas]
2 Hb_000248_010 0.1301616661 - - hypothetical protein PRUPE_ppa008056mg [Prunus persica]
3 Hb_088065_010 0.1479674224 - - hypothetical protein glysoja_007934 [Glycine soja]
4 Hb_002960_050 0.1506757879 - - PREDICTED: uncharacterized protein LOC105635325 [Jatropha curcas]
5 Hb_000248_030 0.1520026962 - - hypothetical protein Pmar_PMAR005331 [Perkinsus marinus ATCC 50983]
6 Hb_168737_010 0.1600451737 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_005965_010 0.1667463914 transcription factor TF Family: MYB-related PREDICTED: myb family transcription factor APL-like [Jatropha curcas]
8 Hb_008277_030 0.1671306449 - - hypothetical protein CICLE_v10024419mg, partial [Citrus clementina]
9 Hb_106005_010 0.1750378248 - - EG5651 [Manihot esculenta]
10 Hb_005731_140 0.1771213875 - - hypothetical protein JCGZ_26808 [Jatropha curcas]
11 Hb_032225_020 0.1787188339 - - hypothetical protein POPTR_0006s08140g [Populus trichocarpa]
12 Hb_032531_060 0.1794965793 - - hypothetical protein PRUPE_ppa017035mg, partial [Prunus persica]
13 Hb_002783_060 0.1825717801 - - PREDICTED: uncharacterized protein LOC105635325 [Jatropha curcas]
14 Hb_003581_010 0.182880746 - - hypothetical protein VITISV_004687 [Vitis vinifera]
15 Hb_000265_130 0.1839387988 - - -
16 Hb_000608_180 0.1889999668 - - PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Tarenaya hassleriana]
17 Hb_001235_060 0.1896735607 - - -
18 Hb_000001_040 0.1955712477 - - unnamed protein product [Coffea canephora]
19 Hb_061581_010 0.1995970712 desease resistance Gene Name: ABC_tran ABC transporter family protein [Hevea brasiliensis]
20 Hb_116632_010 0.2056491039 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_073559_010 Hb_073559_010 Hb_000248_010 Hb_000248_010 Hb_073559_010--Hb_000248_010 Hb_088065_010 Hb_088065_010 Hb_073559_010--Hb_088065_010 Hb_002960_050 Hb_002960_050 Hb_073559_010--Hb_002960_050 Hb_000248_030 Hb_000248_030 Hb_073559_010--Hb_000248_030 Hb_168737_010 Hb_168737_010 Hb_073559_010--Hb_168737_010 Hb_005965_010 Hb_005965_010 Hb_073559_010--Hb_005965_010 Hb_000248_010--Hb_002960_050 Hb_000248_010--Hb_000248_030 Hb_001235_060 Hb_001235_060 Hb_000248_010--Hb_001235_060 Hb_000248_010--Hb_088065_010 Hb_005933_010 Hb_005933_010 Hb_000248_010--Hb_005933_010 Hb_000523_100 Hb_000523_100 Hb_088065_010--Hb_000523_100 Hb_088774_010 Hb_088774_010 Hb_088065_010--Hb_088774_010 Hb_088065_010--Hb_005965_010 Hb_032225_020 Hb_032225_020 Hb_088065_010--Hb_032225_020 Hb_000295_100 Hb_000295_100 Hb_002960_050--Hb_000295_100 Hb_002783_060 Hb_002783_060 Hb_002960_050--Hb_002783_060 Hb_002960_050--Hb_005965_010 Hb_106005_010 Hb_106005_010 Hb_002960_050--Hb_106005_010 Hb_000248_030--Hb_005933_010 Hb_000248_030--Hb_001235_060 Hb_122567_020 Hb_122567_020 Hb_000248_030--Hb_122567_020 Hb_000248_030--Hb_002960_050 Hb_003581_010 Hb_003581_010 Hb_168737_010--Hb_003581_010 Hb_168737_010--Hb_032225_020 Hb_005731_140 Hb_005731_140 Hb_168737_010--Hb_005731_140 Hb_000265_130 Hb_000265_130 Hb_168737_010--Hb_000265_130 Hb_000832_240 Hb_000832_240 Hb_168737_010--Hb_000832_240 Hb_006455_110 Hb_006455_110 Hb_005965_010--Hb_006455_110 Hb_073339_010 Hb_073339_010 Hb_005965_010--Hb_073339_010 Hb_005965_010--Hb_106005_010 Hb_012807_080 Hb_012807_080 Hb_005965_010--Hb_012807_080 Hb_006455_080 Hb_006455_080 Hb_005965_010--Hb_006455_080 Hb_006455_090 Hb_006455_090 Hb_005965_010--Hb_006455_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
104.262 14.9641 8.81767 90.4876 31.041 769.786
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
183.774 69.3235 67.4849 69.0333 13.6089

CAGE analysis