Hb_007749_010

Information

Type -
Description -
Location Contig7749: 22527-22802
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007749_010 0.0 - - -
2 Hb_007157_060 0.1512849373 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
3 Hb_000818_100 0.1895545175 - - PREDICTED: delta(24)-sterol reductase [Jatropha curcas]
4 Hb_065841_010 0.1909584471 - - hypothetical protein JCGZ_18376 [Jatropha curcas]
5 Hb_005843_160 0.190991927 - - PREDICTED: uncharacterized protein LOC105112024 [Populus euphratica]
6 Hb_000091_060 0.1992670315 - - PREDICTED: galactose oxidase [Jatropha curcas]
7 Hb_000181_290 0.2011715559 - - hypothetical protein POPTR_0001s41000g [Populus trichocarpa]
8 Hb_000413_070 0.2096687021 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001493_080 0.2114961181 - - PREDICTED: RING-H2 finger protein ATL3-like [Jatropha curcas]
10 Hb_019592_010 0.2179320067 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Pyrus x bretschneideri]
11 Hb_003910_010 0.2180771298 - - PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas]
12 Hb_009222_070 0.2205207056 - - PREDICTED: xylosyltransferase 2 [Jatropha curcas]
13 Hb_010812_110 0.2211884643 - - putative plant disease resistance family protein [Populus trichocarpa]
14 Hb_003872_010 0.2217271017 - - hypothetical protein PRUPE_ppa013215mg [Prunus persica]
15 Hb_008054_050 0.2248494944 - - PREDICTED: uncharacterized protein LOC101212042 [Cucumis sativus]
16 Hb_002192_030 0.2256034156 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004355_040 0.2260364206 - - epoxide hydrolase, putative [Ricinus communis]
18 Hb_009393_200 0.2262178018 - - PREDICTED: F-box only protein 13 [Jatropha curcas]
19 Hb_000739_200 0.2262330312 transcription factor TF Family: LOB hypothetical protein CICLE_v10021992mg [Citrus clementina]
20 Hb_000270_870 0.2265401707 - - PREDICTED: serine/threonine-protein kinase HT1-like [Jatropha curcas]

Gene co-expression network

sample Hb_007749_010 Hb_007749_010 Hb_007157_060 Hb_007157_060 Hb_007749_010--Hb_007157_060 Hb_000818_100 Hb_000818_100 Hb_007749_010--Hb_000818_100 Hb_065841_010 Hb_065841_010 Hb_007749_010--Hb_065841_010 Hb_005843_160 Hb_005843_160 Hb_007749_010--Hb_005843_160 Hb_000091_060 Hb_000091_060 Hb_007749_010--Hb_000091_060 Hb_000181_290 Hb_000181_290 Hb_007749_010--Hb_000181_290 Hb_007157_060--Hb_065841_010 Hb_006483_030 Hb_006483_030 Hb_007157_060--Hb_006483_030 Hb_145317_010 Hb_145317_010 Hb_007157_060--Hb_145317_010 Hb_007157_060--Hb_000181_290 Hb_007157_060--Hb_000818_100 Hb_029695_050 Hb_029695_050 Hb_000818_100--Hb_029695_050 Hb_009247_010 Hb_009247_010 Hb_000818_100--Hb_009247_010 Hb_009222_070 Hb_009222_070 Hb_000818_100--Hb_009222_070 Hb_000503_020 Hb_000503_020 Hb_000818_100--Hb_000503_020 Hb_000098_050 Hb_000098_050 Hb_000818_100--Hb_000098_050 Hb_000134_120 Hb_000134_120 Hb_000818_100--Hb_000134_120 Hb_013358_100 Hb_013358_100 Hb_065841_010--Hb_013358_100 Hb_008054_050 Hb_008054_050 Hb_065841_010--Hb_008054_050 Hb_068569_010 Hb_068569_010 Hb_065841_010--Hb_068569_010 Hb_161994_040 Hb_161994_040 Hb_065841_010--Hb_161994_040 Hb_177152_010 Hb_177152_010 Hb_065841_010--Hb_177152_010 Hb_005843_160--Hb_000091_060 Hb_006831_070 Hb_006831_070 Hb_005843_160--Hb_006831_070 Hb_091761_010 Hb_091761_010 Hb_005843_160--Hb_091761_010 Hb_008511_060 Hb_008511_060 Hb_005843_160--Hb_008511_060 Hb_074197_020 Hb_074197_020 Hb_005843_160--Hb_074197_020 Hb_000258_290 Hb_000258_290 Hb_005843_160--Hb_000258_290 Hb_009485_020 Hb_009485_020 Hb_000091_060--Hb_009485_020 Hb_000091_060--Hb_074197_020 Hb_000091_060--Hb_000258_290 Hb_002498_050 Hb_002498_050 Hb_000091_060--Hb_002498_050 Hb_029866_100 Hb_029866_100 Hb_000091_060--Hb_029866_100 Hb_004611_030 Hb_004611_030 Hb_000181_290--Hb_004611_030 Hb_073171_090 Hb_073171_090 Hb_000181_290--Hb_073171_090 Hb_083628_010 Hb_083628_010 Hb_000181_290--Hb_083628_010 Hb_000181_290--Hb_009222_070 Hb_030736_060 Hb_030736_060 Hb_000181_290--Hb_030736_060 Hb_003910_010 Hb_003910_010 Hb_000181_290--Hb_003910_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.7384 5.02519 4.13316 15.0188 3.77951 3.79063
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.933572 0 2.00037 2.40826 2.1604

CAGE analysis