Hb_005928_090

Information

Type -
Description -
Location Contig5928: 90411-94080
Sequence    

Annotation

kegg
ID egr:104426607
description magnesium transporter MRS2-I-like
nr
ID XP_012092099.1
description PREDICTED: magnesium transporter MRS2-I-like isoform X3 [Jatropha curcas]
swissprot
ID Q304A0
description Magnesium transporter MRS2-7 OS=Arabidopsis thaliana GN=MRS2-7 PE=2 SV=1
trembl
ID A0A059A7V5
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03298 PE=4 SV=1
Gene Ontology
ID GO:0016021
description magnesium transporter mrs2-i-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005928_090 0.0 - - PREDICTED: magnesium transporter MRS2-I-like isoform X3 [Jatropha curcas]
2 Hb_030784_010 0.2160886099 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]
3 Hb_002379_040 0.2719409541 - - -
4 Hb_000788_050 0.296893942 - - Chloride channel protein CLC-c [Populus trichocarpa]
5 Hb_003077_120 0.3067973517 - - -
6 Hb_001488_310 0.3182620147 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
7 Hb_000522_140 0.3187834525 - - protein transporter, putative [Ricinus communis]
8 Hb_006794_010 0.3226858015 - - elicitor-responsive protein [Hevea brasiliensis]
9 Hb_011200_010 0.3241323856 - - -
10 Hb_021888_040 0.3361509699 - - PREDICTED: uncharacterized protein LOC103499290 isoform X2 [Cucumis melo]
11 Hb_172921_010 0.3404092565 - - hypothetical protein CICLE_v10006890mg, partial [Citrus clementina]
12 Hb_003025_060 0.3420267643 - - PREDICTED: protein TOO MANY MOUTHS [Jatropha curcas]
13 Hb_011287_040 0.3437012831 - - PREDICTED: OTU domain-containing protein At3g57810-like isoform X1 [Jatropha curcas]
14 Hb_003551_010 0.3443513541 - - hypothetical protein CISIN_1g030786mg [Citrus sinensis]
15 Hb_000946_160 0.3470252342 transcription factor TF Family: GNAT PREDICTED: uncharacterized N-acetyltransferase ycf52 [Jatropha curcas]
16 Hb_002291_040 0.3482763719 - - hypothetical protein VITISV_030841 [Vitis vinifera]
17 Hb_005723_060 0.3492466179 - - -
18 Hb_013394_100 0.3524890534 - - PREDICTED: uncharacterized protein LOC105135144 [Populus euphratica]
19 Hb_178620_010 0.3532726821 - - ADP-ribosylation factor, arf, putative [Ricinus communis]
20 Hb_000292_080 0.353900282 - - hypothetical protein CISIN_1g034193mg [Citrus sinensis]

Gene co-expression network

sample Hb_005928_090 Hb_005928_090 Hb_030784_010 Hb_030784_010 Hb_005928_090--Hb_030784_010 Hb_002379_040 Hb_002379_040 Hb_005928_090--Hb_002379_040 Hb_000788_050 Hb_000788_050 Hb_005928_090--Hb_000788_050 Hb_003077_120 Hb_003077_120 Hb_005928_090--Hb_003077_120 Hb_001488_310 Hb_001488_310 Hb_005928_090--Hb_001488_310 Hb_000522_140 Hb_000522_140 Hb_005928_090--Hb_000522_140 Hb_030784_010--Hb_000788_050 Hb_030784_010--Hb_001488_310 Hb_011287_040 Hb_011287_040 Hb_030784_010--Hb_011287_040 Hb_002391_090 Hb_002391_090 Hb_030784_010--Hb_002391_090 Hb_073799_010 Hb_073799_010 Hb_030784_010--Hb_073799_010 Hb_021888_040 Hb_021888_040 Hb_002379_040--Hb_021888_040 Hb_011200_010 Hb_011200_010 Hb_002379_040--Hb_011200_010 Hb_059978_010 Hb_059978_010 Hb_002379_040--Hb_059978_010 Hb_000668_020 Hb_000668_020 Hb_002379_040--Hb_000668_020 Hb_012675_080 Hb_012675_080 Hb_002379_040--Hb_012675_080 Hb_003551_010 Hb_003551_010 Hb_002379_040--Hb_003551_010 Hb_007524_050 Hb_007524_050 Hb_000788_050--Hb_007524_050 Hb_172921_010 Hb_172921_010 Hb_000788_050--Hb_172921_010 Hb_000788_050--Hb_002391_090 Hb_000788_050--Hb_002379_040 Hb_000261_360 Hb_000261_360 Hb_003077_120--Hb_000261_360 Hb_000331_500 Hb_000331_500 Hb_003077_120--Hb_000331_500 Hb_147123_010 Hb_147123_010 Hb_003077_120--Hb_147123_010 Hb_136765_010 Hb_136765_010 Hb_003077_120--Hb_136765_010 Hb_004243_010 Hb_004243_010 Hb_003077_120--Hb_004243_010 Hb_000253_030 Hb_000253_030 Hb_003077_120--Hb_000253_030 Hb_053345_010 Hb_053345_010 Hb_001488_310--Hb_053345_010 Hb_001488_310--Hb_073799_010 Hb_128473_010 Hb_128473_010 Hb_001488_310--Hb_128473_010 Hb_013394_100 Hb_013394_100 Hb_001488_310--Hb_013394_100 Hb_001488_310--Hb_011287_040 Hb_000850_040 Hb_000850_040 Hb_000522_140--Hb_000850_040 Hb_000099_210 Hb_000099_210 Hb_000522_140--Hb_000099_210 Hb_000136_130 Hb_000136_130 Hb_000522_140--Hb_000136_130 Hb_002235_130 Hb_002235_130 Hb_000522_140--Hb_002235_130 Hb_002265_030 Hb_002265_030 Hb_000522_140--Hb_002265_030 Hb_010964_020 Hb_010964_020 Hb_000522_140--Hb_010964_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0543655 0 0 0.309996 0.0862776 0.152748
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0781962 0 0 0

CAGE analysis