Hb_005701_100

Information

Type -
Description -
Location Contig5701: 74131-77529
Sequence    

Annotation

kegg
ID rcu:RCOM_1596580
description protein with unknown function (EC:3.1.3.16 1.3.1.74)
nr
ID XP_012071977.1
description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
swissprot
ID C0LGS2
description Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=2 SV=1
trembl
ID A0A067KR17
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04517 PE=4 SV=1
Gene Ontology
ID GO:0005886
description probable lrr receptor-like serine threonine-protein kinase at4g36180

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005701_100 0.0 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
2 Hb_036602_010 0.1099310837 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
3 Hb_008215_020 0.1111189422 - - ankyrin repeat-containing protein, putative [Ricinus communis]
4 Hb_014549_010 0.1179313604 - - PREDICTED: uncharacterized protein LOC101512634 [Cicer arietinum]
5 Hb_012092_040 0.1215295995 - - PREDICTED: expansin-A1 isoform X1 [Jatropha curcas]
6 Hb_025163_020 0.1232682199 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
7 Hb_177195_010 0.1238393552 - - Leucine-rich repeat protein kinase family protein isoform 3, partial [Theobroma cacao]
8 Hb_012016_050 0.128002177 - - hypothetical protein JCGZ_09036 [Jatropha curcas]
9 Hb_000390_010 0.1289688114 - - PREDICTED: protein CDI [Jatropha curcas]
10 Hb_001247_060 0.1292290081 - - zinc finger protein, putative [Ricinus communis]
11 Hb_003489_010 0.1365276849 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
12 Hb_089140_070 0.1372081521 - - PREDICTED: uncharacterized protein LOC105637961 [Jatropha curcas]
13 Hb_185666_010 0.137222393 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 3 [Jatropha curcas]
14 Hb_000069_650 0.1402695015 - - conserved hypothetical protein [Ricinus communis]
15 Hb_128392_010 0.1422213607 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein At3g19184 isoform X1 [Jatropha curcas]
16 Hb_000035_230 0.1443868232 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
17 Hb_000089_090 0.1459503845 - - hypothetical protein POPTR_0019s12670g [Populus trichocarpa]
18 Hb_000289_020 0.1478205247 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
19 Hb_003847_060 0.1484430412 - - syntaxin, putative [Ricinus communis]
20 Hb_003464_010 0.1501648351 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_005701_100 Hb_005701_100 Hb_036602_010 Hb_036602_010 Hb_005701_100--Hb_036602_010 Hb_008215_020 Hb_008215_020 Hb_005701_100--Hb_008215_020 Hb_014549_010 Hb_014549_010 Hb_005701_100--Hb_014549_010 Hb_012092_040 Hb_012092_040 Hb_005701_100--Hb_012092_040 Hb_025163_020 Hb_025163_020 Hb_005701_100--Hb_025163_020 Hb_177195_010 Hb_177195_010 Hb_005701_100--Hb_177195_010 Hb_036602_010--Hb_014549_010 Hb_003489_010 Hb_003489_010 Hb_036602_010--Hb_003489_010 Hb_000483_120 Hb_000483_120 Hb_036602_010--Hb_000483_120 Hb_004154_010 Hb_004154_010 Hb_036602_010--Hb_004154_010 Hb_006197_010 Hb_006197_010 Hb_036602_010--Hb_006197_010 Hb_008215_020--Hb_025163_020 Hb_004531_060 Hb_004531_060 Hb_008215_020--Hb_004531_060 Hb_185666_010 Hb_185666_010 Hb_008215_020--Hb_185666_010 Hb_000069_650 Hb_000069_650 Hb_008215_020--Hb_000069_650 Hb_005116_030 Hb_005116_030 Hb_008215_020--Hb_005116_030 Hb_014549_010--Hb_004154_010 Hb_014549_010--Hb_003489_010 Hb_185830_090 Hb_185830_090 Hb_014549_010--Hb_185830_090 Hb_006721_060 Hb_006721_060 Hb_014549_010--Hb_006721_060 Hb_000089_090 Hb_000089_090 Hb_012092_040--Hb_000089_090 Hb_001247_060 Hb_001247_060 Hb_012092_040--Hb_001247_060 Hb_089140_070 Hb_089140_070 Hb_012092_040--Hb_089140_070 Hb_000035_230 Hb_000035_230 Hb_012092_040--Hb_000035_230 Hb_003464_010 Hb_003464_010 Hb_012092_040--Hb_003464_010 Hb_000390_010 Hb_000390_010 Hb_012092_040--Hb_000390_010 Hb_025163_020--Hb_004531_060 Hb_000890_140 Hb_000890_140 Hb_025163_020--Hb_000890_140 Hb_025163_020--Hb_005116_030 Hb_000397_170 Hb_000397_170 Hb_025163_020--Hb_000397_170 Hb_177195_010--Hb_089140_070 Hb_000098_270 Hb_000098_270 Hb_177195_010--Hb_000098_270 Hb_000289_020 Hb_000289_020 Hb_177195_010--Hb_000289_020 Hb_006810_040 Hb_006810_040 Hb_177195_010--Hb_006810_040 Hb_000878_120 Hb_000878_120 Hb_177195_010--Hb_000878_120 Hb_002028_270 Hb_002028_270 Hb_177195_010--Hb_002028_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0507574 0.493743 0.563864 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0634185 0

CAGE analysis