Hb_177195_010

Information

Type -
Description -
Location Contig177195: 352-922
Sequence    

Annotation

kegg
ID cit:102609477
description LRR receptor-like serine/threonine-protein kinase FEI 1-like
nr
ID XP_007037207.1
description Leucine-rich repeat protein kinase family protein isoform 3, partial [Theobroma cacao]
swissprot
ID C0LGL9
description LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1
trembl
ID A0A061FXE4
description Leucine-rich repeat protein kinase family protein isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_013815 PE=3 SV=1
Gene Ontology
ID GO:0004672
description lrr receptor-like serine threonine-protein kinase fei 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_177195_010 0.0 - - Leucine-rich repeat protein kinase family protein isoform 3, partial [Theobroma cacao]
2 Hb_089140_070 0.1061352519 - - PREDICTED: uncharacterized protein LOC105637961 [Jatropha curcas]
3 Hb_000098_270 0.110140968 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
4 Hb_000289_020 0.1135730927 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
5 Hb_006810_040 0.1155721531 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
6 Hb_000878_120 0.1177712585 - - PREDICTED: protein downstream neighbor of Son [Jatropha curcas]
7 Hb_002028_270 0.1186240084 - - Pectinesterase-1 precursor, putative [Ricinus communis]
8 Hb_005701_100 0.1238393552 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
9 Hb_000390_010 0.1271767046 - - PREDICTED: protein CDI [Jatropha curcas]
10 Hb_000270_050 0.1284316988 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 2 [Jatropha curcas]
11 Hb_001971_040 0.1284986687 - - PREDICTED: beta-glucosidase 44-like [Jatropha curcas]
12 Hb_007126_010 0.1286679188 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
13 Hb_001377_370 0.1298386971 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
14 Hb_010080_050 0.133931137 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
15 Hb_012092_040 0.1339732531 - - PREDICTED: expansin-A1 isoform X1 [Jatropha curcas]
16 Hb_004531_060 0.1379097303 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 3 [Jatropha curcas]
17 Hb_002307_150 0.1381311916 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA4-like [Jatropha curcas]
18 Hb_001141_440 0.14000218 - - PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
19 Hb_006351_030 0.1409054115 - - PREDICTED: E3 ubiquitin-protein ligase MARCH8-like [Jatropha curcas]
20 Hb_001950_090 0.1409843213 - - PREDICTED: microtubule-associated protein RP/EB family member 1C [Jatropha curcas]

Gene co-expression network

sample Hb_177195_010 Hb_177195_010 Hb_089140_070 Hb_089140_070 Hb_177195_010--Hb_089140_070 Hb_000098_270 Hb_000098_270 Hb_177195_010--Hb_000098_270 Hb_000289_020 Hb_000289_020 Hb_177195_010--Hb_000289_020 Hb_006810_040 Hb_006810_040 Hb_177195_010--Hb_006810_040 Hb_000878_120 Hb_000878_120 Hb_177195_010--Hb_000878_120 Hb_002028_270 Hb_002028_270 Hb_177195_010--Hb_002028_270 Hb_001971_040 Hb_001971_040 Hb_089140_070--Hb_001971_040 Hb_012092_040 Hb_012092_040 Hb_089140_070--Hb_012092_040 Hb_089140_070--Hb_006810_040 Hb_010080_050 Hb_010080_050 Hb_089140_070--Hb_010080_050 Hb_000390_010 Hb_000390_010 Hb_089140_070--Hb_000390_010 Hb_000035_230 Hb_000035_230 Hb_089140_070--Hb_000035_230 Hb_006351_030 Hb_006351_030 Hb_000098_270--Hb_006351_030 Hb_000098_270--Hb_000289_020 Hb_008725_100 Hb_008725_100 Hb_000098_270--Hb_008725_100 Hb_000098_270--Hb_006810_040 Hb_010672_010 Hb_010672_010 Hb_000098_270--Hb_010672_010 Hb_043552_010 Hb_043552_010 Hb_000098_270--Hb_043552_010 Hb_006120_130 Hb_006120_130 Hb_000289_020--Hb_006120_130 Hb_000289_020--Hb_002028_270 Hb_005211_170 Hb_005211_170 Hb_000289_020--Hb_005211_170 Hb_000289_020--Hb_043552_010 Hb_003464_010 Hb_003464_010 Hb_000289_020--Hb_003464_010 Hb_006810_040--Hb_001971_040 Hb_000522_160 Hb_000522_160 Hb_006810_040--Hb_000522_160 Hb_006810_040--Hb_002028_270 Hb_159809_040 Hb_159809_040 Hb_006810_040--Hb_159809_040 Hb_005332_030 Hb_005332_030 Hb_006810_040--Hb_005332_030 Hb_003055_080 Hb_003055_080 Hb_000878_120--Hb_003055_080 Hb_000878_120--Hb_006351_030 Hb_000862_050 Hb_000862_050 Hb_000878_120--Hb_000862_050 Hb_000878_120--Hb_008725_100 Hb_000878_120--Hb_006120_130 Hb_002028_270--Hb_001971_040 Hb_000878_080 Hb_000878_080 Hb_002028_270--Hb_000878_080 Hb_000359_100 Hb_000359_100 Hb_002028_270--Hb_000359_100 Hb_004005_060 Hb_004005_060 Hb_002028_270--Hb_004005_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.672237 4.69696 5.51559 0.11973 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.73667 0.216108

CAGE analysis