Hb_036602_010

Information

Type -
Description -
Location Contig36602: 2-613
Sequence    

Annotation

kegg
ID rcu:RCOM_0737170
description kinase, putative
nr
ID XP_012066409.1
description PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
swissprot
ID Q9LMN7
description Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1
trembl
ID B9SNI7
description Kinase, putative OS=Ricinus communis GN=RCOM_0737170 PE=3 SV=1
Gene Ontology
ID GO:0005622
description wall-associated receptor kinase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036602_010 0.0 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
2 Hb_014549_010 0.0452393293 - - PREDICTED: uncharacterized protein LOC101512634 [Cicer arietinum]
3 Hb_003489_010 0.0782752647 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
4 Hb_000483_120 0.0904295751 transcription factor TF Family: MYB hypothetical protein POPTR_0004s12530g [Populus trichocarpa]
5 Hb_005701_100 0.1099310837 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
6 Hb_004154_010 0.1104536995 - - Rop guanine nucleotide exchange factor, putative [Ricinus communis]
7 Hb_006197_010 0.1211647797 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
8 Hb_011826_010 0.1276809694 - - Disease resistance protein RPM1, putative [Ricinus communis]
9 Hb_057721_010 0.1279090445 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
10 Hb_177179_020 0.1290901169 - - conserved hypothetical protein [Ricinus communis]
11 Hb_119583_030 0.1302144251 - - unnamed protein product [Vitis vinifera]
12 Hb_005217_070 0.1339188553 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000025_800 0.1364548586 - - hypothetical protein VITISV_020143 [Vitis vinifera]
14 Hb_000289_020 0.146035742 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
15 Hb_005599_010 0.1461054733 - - Protein MLO, putative [Ricinus communis]
16 Hb_019733_020 0.1485143664 - - hypothetical protein POPTR_0003s15470g [Populus trichocarpa]
17 Hb_002163_070 0.1488192354 - - hypothetical protein JCGZ_13728 [Jatropha curcas]
18 Hb_010252_010 0.1496986576 - - -
19 Hb_006721_060 0.151421108 - - RnaseH (mitochondrion) [Malus domestica]
20 Hb_137862_020 0.1521865853 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_036602_010 Hb_036602_010 Hb_014549_010 Hb_014549_010 Hb_036602_010--Hb_014549_010 Hb_003489_010 Hb_003489_010 Hb_036602_010--Hb_003489_010 Hb_000483_120 Hb_000483_120 Hb_036602_010--Hb_000483_120 Hb_005701_100 Hb_005701_100 Hb_036602_010--Hb_005701_100 Hb_004154_010 Hb_004154_010 Hb_036602_010--Hb_004154_010 Hb_006197_010 Hb_006197_010 Hb_036602_010--Hb_006197_010 Hb_014549_010--Hb_004154_010 Hb_014549_010--Hb_003489_010 Hb_014549_010--Hb_005701_100 Hb_185830_090 Hb_185830_090 Hb_014549_010--Hb_185830_090 Hb_006721_060 Hb_006721_060 Hb_014549_010--Hb_006721_060 Hb_003489_010--Hb_000483_120 Hb_000270_050 Hb_000270_050 Hb_003489_010--Hb_000270_050 Hb_000289_020 Hb_000289_020 Hb_003489_010--Hb_000289_020 Hb_177179_020 Hb_177179_020 Hb_003489_010--Hb_177179_020 Hb_000483_120--Hb_177179_020 Hb_057721_010 Hb_057721_010 Hb_000483_120--Hb_057721_010 Hb_119583_030 Hb_119583_030 Hb_000483_120--Hb_119583_030 Hb_000025_800 Hb_000025_800 Hb_000483_120--Hb_000025_800 Hb_179367_020 Hb_179367_020 Hb_000483_120--Hb_179367_020 Hb_008215_020 Hb_008215_020 Hb_005701_100--Hb_008215_020 Hb_012092_040 Hb_012092_040 Hb_005701_100--Hb_012092_040 Hb_025163_020 Hb_025163_020 Hb_005701_100--Hb_025163_020 Hb_177195_010 Hb_177195_010 Hb_005701_100--Hb_177195_010 Hb_005599_010 Hb_005599_010 Hb_004154_010--Hb_005599_010 Hb_004154_010--Hb_185830_090 Hb_003226_060 Hb_003226_060 Hb_004154_010--Hb_003226_060 Hb_003050_170 Hb_003050_170 Hb_004154_010--Hb_003050_170 Hb_023712_020 Hb_023712_020 Hb_006197_010--Hb_023712_020 Hb_022465_010 Hb_022465_010 Hb_006197_010--Hb_022465_010 Hb_137862_020 Hb_137862_020 Hb_006197_010--Hb_137862_020 Hb_006197_010--Hb_057721_010 Hb_000170_260 Hb_000170_260 Hb_006197_010--Hb_000170_260 Hb_019429_020 Hb_019429_020 Hb_006197_010--Hb_019429_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.107429 0.402057 0.501635 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0315686 0

CAGE analysis