Hb_004217_010

Information

Type -
Description -
Location Contig4217: 7889-11311
Sequence    

Annotation

kegg
ID pop:POPTR_0003s18490g
description POPTRDRAFT_854085; putative wall-associated kinase family protein
nr
ID XP_002304841.2
description putative wall-associated kinase family protein [Populus trichocarpa]
swissprot
ID Q9C9L5
description Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1
trembl
ID B9GXW0
description Putative wall-associated kinase family protein OS=Populus trichocarpa GN=POPTR_0003s18490g PE=4 SV=2
Gene Ontology
ID GO:0016021
description wall-associated kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004217_010 0.0 - - putative wall-associated kinase family protein [Populus trichocarpa]
2 Hb_000140_240 0.1047979788 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s08640g [Populus trichocarpa]
3 Hb_001571_010 0.1247569262 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
4 Hb_071381_010 0.1422032529 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
5 Hb_000352_080 0.1477392983 - - PREDICTED: lipid transfer-like protein VAS [Jatropha curcas]
6 Hb_003891_060 0.1505561476 - - PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Glycine max]
7 Hb_000405_040 0.151028133 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
8 Hb_010697_030 0.1586840953 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
9 Hb_010839_070 0.1607716866 - - uncharacterized protein LOC100810725 [Glycine max]
10 Hb_020480_050 0.1620986077 - - putative wall-associated kinase family protein [Populus trichocarpa]
11 Hb_000155_140 0.1622040796 - - o-methyltransferase, putative [Ricinus communis]
12 Hb_000317_210 0.1725864317 transcription factor TF Family: MYB PREDICTED: transcription factor MYB39 [Jatropha curcas]
13 Hb_009780_060 0.1726481891 rubber biosynthesis Gene Name: Geranyl geranyl diphosphate synthase geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
14 Hb_010253_010 0.1730567706 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent) [Amborella trichopoda]
15 Hb_004254_070 0.174226258 transcription factor TF Family: NAC hypothetical protein POPTR_0015s03700g [Populus trichocarpa]
16 Hb_002534_080 0.1752265469 - - zinc finger protein, putative [Ricinus communis]
17 Hb_008160_020 0.1768060335 - - PREDICTED: AT-hook motif nuclear-localized protein 23-like isoform X1 [Jatropha curcas]
18 Hb_000446_100 0.1771969992 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
19 Hb_117464_010 0.1773431983 - - PREDICTED: flavone 3'-O-methyltransferase 1-like [Jatropha curcas]
20 Hb_000229_080 0.1775770718 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]

Gene co-expression network

sample Hb_004217_010 Hb_004217_010 Hb_000140_240 Hb_000140_240 Hb_004217_010--Hb_000140_240 Hb_001571_010 Hb_001571_010 Hb_004217_010--Hb_001571_010 Hb_071381_010 Hb_071381_010 Hb_004217_010--Hb_071381_010 Hb_000352_080 Hb_000352_080 Hb_004217_010--Hb_000352_080 Hb_003891_060 Hb_003891_060 Hb_004217_010--Hb_003891_060 Hb_000405_040 Hb_000405_040 Hb_004217_010--Hb_000405_040 Hb_014387_040 Hb_014387_040 Hb_000140_240--Hb_014387_040 Hb_000140_240--Hb_001571_010 Hb_000069_050 Hb_000069_050 Hb_000140_240--Hb_000069_050 Hb_000038_090 Hb_000038_090 Hb_000140_240--Hb_000038_090 Hb_003121_020 Hb_003121_020 Hb_000140_240--Hb_003121_020 Hb_010839_070 Hb_010839_070 Hb_001571_010--Hb_010839_070 Hb_001571_010--Hb_071381_010 Hb_117464_010 Hb_117464_010 Hb_001571_010--Hb_117464_010 Hb_008160_020 Hb_008160_020 Hb_001571_010--Hb_008160_020 Hb_000640_270 Hb_000640_270 Hb_001571_010--Hb_000640_270 Hb_001571_010--Hb_003121_020 Hb_071381_010--Hb_008160_020 Hb_071381_010--Hb_117464_010 Hb_071381_010--Hb_010839_070 Hb_001081_020 Hb_001081_020 Hb_071381_010--Hb_001081_020 Hb_071381_010--Hb_000405_040 Hb_001134_040 Hb_001134_040 Hb_000352_080--Hb_001134_040 Hb_000352_080--Hb_003891_060 Hb_000155_140 Hb_000155_140 Hb_000352_080--Hb_000155_140 Hb_058620_010 Hb_058620_010 Hb_000352_080--Hb_058620_010 Hb_002805_230 Hb_002805_230 Hb_000352_080--Hb_002805_230 Hb_007417_020 Hb_007417_020 Hb_000352_080--Hb_007417_020 Hb_003891_060--Hb_000155_140 Hb_000446_100 Hb_000446_100 Hb_003891_060--Hb_000446_100 Hb_004254_070 Hb_004254_070 Hb_003891_060--Hb_004254_070 Hb_001901_090 Hb_001901_090 Hb_003891_060--Hb_001901_090 Hb_001456_040 Hb_001456_040 Hb_003891_060--Hb_001456_040 Hb_014034_020 Hb_014034_020 Hb_000405_040--Hb_014034_020 Hb_000025_250 Hb_000025_250 Hb_000405_040--Hb_000025_250 Hb_001032_060 Hb_001032_060 Hb_000405_040--Hb_001032_060 Hb_000405_040--Hb_004254_070 Hb_000229_080 Hb_000229_080 Hb_000405_040--Hb_000229_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0500451 0.0724732 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0275498 0 0 1.0195 0

CAGE analysis