Hb_117464_010

Information

Type -
Description -
Location Contig117464: 141-938
Sequence    

Annotation

kegg
ID rcu:RCOM_0686150
description o-methyltransferase, putative (EC:2.1.1.68)
nr
ID XP_012069223.1
description PREDICTED: flavone 3'-O-methyltransferase 1-like [Jatropha curcas]
swissprot
ID Q8W013
description Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1
trembl
ID A0A067KWP8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24586 PE=4 SV=1
Gene Ontology
ID GO:0046983
description caffeic acid 3-o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_117464_010 0.0 - - PREDICTED: flavone 3'-O-methyltransferase 1-like [Jatropha curcas]
2 Hb_008160_020 0.0066254961 - - PREDICTED: AT-hook motif nuclear-localized protein 23-like isoform X1 [Jatropha curcas]
3 Hb_000640_270 0.0323350848 - - PREDICTED: LOW QUALITY PROTEIN: probable pectinesterase 30 [Jatropha curcas]
4 Hb_001081_020 0.0430951934 - - Cytochrome P450 76C2 [Triticum urartu]
5 Hb_010839_070 0.0492682404 - - uncharacterized protein LOC100810725 [Glycine max]
6 Hb_071381_010 0.0566949086 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
7 Hb_039342_030 0.0902742613 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001571_010 0.100570806 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
9 Hb_006196_020 0.1036901859 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100-like [Populus euphratica]
10 Hb_000813_120 0.1127711954 - - PREDICTED: serine carboxypeptidase-like 18 [Tarenaya hassleriana]
11 Hb_000317_210 0.1133220505 transcription factor TF Family: MYB PREDICTED: transcription factor MYB39 [Jatropha curcas]
12 Hb_003010_040 0.1201373485 - - hypothetical protein AALP_AA7G248200 [Arabis alpina]
13 Hb_016172_010 0.125203071 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
14 Hb_000405_040 0.1254601826 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
15 Hb_005747_020 0.1257069678 - - bacterial-induced peroxidase [Gossypium schwendimanii]
16 Hb_001047_250 0.1266491827 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
17 Hb_042664_010 0.1281432413 - - hypothetical protein POPTR_0001s07640g, partial [Populus trichocarpa]
18 Hb_000160_230 0.128380989 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
19 Hb_001114_290 0.1312198978 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000859_040 0.1318155852 - - Early nodulin 16 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_117464_010 Hb_117464_010 Hb_008160_020 Hb_008160_020 Hb_117464_010--Hb_008160_020 Hb_000640_270 Hb_000640_270 Hb_117464_010--Hb_000640_270 Hb_001081_020 Hb_001081_020 Hb_117464_010--Hb_001081_020 Hb_010839_070 Hb_010839_070 Hb_117464_010--Hb_010839_070 Hb_071381_010 Hb_071381_010 Hb_117464_010--Hb_071381_010 Hb_039342_030 Hb_039342_030 Hb_117464_010--Hb_039342_030 Hb_008160_020--Hb_001081_020 Hb_008160_020--Hb_000640_270 Hb_008160_020--Hb_071381_010 Hb_008160_020--Hb_010839_070 Hb_008160_020--Hb_039342_030 Hb_000640_270--Hb_010839_070 Hb_000640_270--Hb_001081_020 Hb_000640_270--Hb_071381_010 Hb_000640_270--Hb_039342_030 Hb_001081_020--Hb_071381_010 Hb_006196_020 Hb_006196_020 Hb_001081_020--Hb_006196_020 Hb_001081_020--Hb_010839_070 Hb_001571_010 Hb_001571_010 Hb_010839_070--Hb_001571_010 Hb_010839_070--Hb_071381_010 Hb_071381_010--Hb_001571_010 Hb_000405_040 Hb_000405_040 Hb_071381_010--Hb_000405_040 Hb_016172_010 Hb_016172_010 Hb_039342_030--Hb_016172_010 Hb_039342_030--Hb_006196_020 Hb_008705_070 Hb_008705_070 Hb_039342_030--Hb_008705_070 Hb_042664_010 Hb_042664_010 Hb_039342_030--Hb_042664_010 Hb_002615_050 Hb_002615_050 Hb_039342_030--Hb_002615_050 Hb_000160_230 Hb_000160_230 Hb_039342_030--Hb_000160_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.130473 0.0343068 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.844046 0

CAGE analysis