Hb_001081_020

Information

Type -
Description -
Location Contig1081: 32888-34591
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa017849mg
description hypothetical protein
nr
ID EMS68117.1
description Cytochrome P450 76C2 [Triticum urartu]
swissprot
ID -
description -
trembl
ID M8A6Q6
description Cytochrome P450 76C2 OS=Triticum urartu GN=TRIUR3_10294 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02462: 32941-33273
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001081_020 0.0 - - Cytochrome P450 76C2 [Triticum urartu]
2 Hb_008160_020 0.0378745486 - - PREDICTED: AT-hook motif nuclear-localized protein 23-like isoform X1 [Jatropha curcas]
3 Hb_117464_010 0.0430951934 - - PREDICTED: flavone 3'-O-methyltransferase 1-like [Jatropha curcas]
4 Hb_000640_270 0.0661454785 - - PREDICTED: LOW QUALITY PROTEIN: probable pectinesterase 30 [Jatropha curcas]
5 Hb_071381_010 0.073748875 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
6 Hb_006196_020 0.0875004188 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100-like [Populus euphratica]
7 Hb_010839_070 0.0911625551 - - uncharacterized protein LOC100810725 [Glycine max]
8 Hb_005747_020 0.0916974234 - - bacterial-induced peroxidase [Gossypium schwendimanii]
9 Hb_039342_030 0.0919772812 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001114_290 0.0951552977 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005747_040 0.0968574581 - - PREDICTED: peroxidase N1-like, partial [Nicotiana sylvestris]
12 Hb_173102_010 0.0970467338 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
13 Hb_106528_010 0.0971499421 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
14 Hb_002551_010 0.0995416786 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_002997_010 0.1019147646 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Malus domestica]
16 Hb_001410_090 0.1022206723 - - transferase, putative [Ricinus communis]
17 Hb_001114_300 0.102874409 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
18 Hb_000859_040 0.1029643589 - - Early nodulin 16 precursor, putative [Ricinus communis]
19 Hb_000264_250 0.1032349819 - - thioredoxin family protein [Arabidopsis thaliana]
20 Hb_000160_230 0.1044262834 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]

Gene co-expression network

sample Hb_001081_020 Hb_001081_020 Hb_008160_020 Hb_008160_020 Hb_001081_020--Hb_008160_020 Hb_117464_010 Hb_117464_010 Hb_001081_020--Hb_117464_010 Hb_000640_270 Hb_000640_270 Hb_001081_020--Hb_000640_270 Hb_071381_010 Hb_071381_010 Hb_001081_020--Hb_071381_010 Hb_006196_020 Hb_006196_020 Hb_001081_020--Hb_006196_020 Hb_010839_070 Hb_010839_070 Hb_001081_020--Hb_010839_070 Hb_008160_020--Hb_117464_010 Hb_008160_020--Hb_000640_270 Hb_008160_020--Hb_071381_010 Hb_008160_020--Hb_010839_070 Hb_039342_030 Hb_039342_030 Hb_008160_020--Hb_039342_030 Hb_117464_010--Hb_000640_270 Hb_117464_010--Hb_010839_070 Hb_117464_010--Hb_071381_010 Hb_117464_010--Hb_039342_030 Hb_000640_270--Hb_010839_070 Hb_000640_270--Hb_071381_010 Hb_000640_270--Hb_039342_030 Hb_071381_010--Hb_010839_070 Hb_001571_010 Hb_001571_010 Hb_071381_010--Hb_001571_010 Hb_000405_040 Hb_000405_040 Hb_071381_010--Hb_000405_040 Hb_000160_230 Hb_000160_230 Hb_006196_020--Hb_000160_230 Hb_007810_140 Hb_007810_140 Hb_006196_020--Hb_007810_140 Hb_002615_050 Hb_002615_050 Hb_006196_020--Hb_002615_050 Hb_042664_010 Hb_042664_010 Hb_006196_020--Hb_042664_010 Hb_006196_020--Hb_039342_030 Hb_000859_040 Hb_000859_040 Hb_006196_020--Hb_000859_040 Hb_010839_070--Hb_001571_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0957741 0.0130251 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.615216 0

CAGE analysis