Hb_003750_030

Information

Type -
Description -
Location Contig3750: 17447-20237
Sequence    

Annotation

kegg
ID rcu:RCOM_0371830
description calmodulin-binding heat-shock protein, putative
nr
ID XP_002531920.1
description calmodulin-binding heat-shock protein, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T101
description Calmodulin-binding heat-shock protein, putative OS=Ricinus communis GN=RCOM_0371830 PE=4 SV=1
Gene Ontology
ID GO:0005886
description calmodulin-binding heat-shock

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003750_030 0.0 - - calmodulin-binding heat-shock protein, putative [Ricinus communis]
2 Hb_080147_100 0.2003701338 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN [Jatropha curcas]
3 Hb_004208_130 0.2117294279 - - hypothetical protein JCGZ_16532 [Jatropha curcas]
4 Hb_003226_160 0.2148671674 - - PREDICTED: poly [ADP-ribose] polymerase 2-like isoform X2 [Populus euphratica]
5 Hb_000116_420 0.2201568981 - - PREDICTED: monosaccharide-sensing protein 2-like [Jatropha curcas]
6 Hb_002798_010 0.2297754469 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
7 Hb_000139_420 0.2330157546 - - Stem-specific protein TSJT1, putative [Ricinus communis]
8 Hb_138710_010 0.2379989292 - - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Gossypium arboreum]
9 Hb_002027_140 0.2467983325 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.6 [Jatropha curcas]
10 Hb_000836_490 0.2530604666 - - PREDICTED: E3 SUMO-protein ligase pli1-like [Jatropha curcas]
11 Hb_007153_040 0.2552429304 - - PREDICTED: uncharacterized protein LOC105633515 isoform X1 [Jatropha curcas]
12 Hb_105602_010 0.2554144154 - - Ketose-bisphosphate aldolase class-II family protein isoform 5 [Theobroma cacao]
13 Hb_000805_320 0.2579943301 - - PREDICTED: putative hydrolase C777.06c [Jatropha curcas]
14 Hb_000297_020 0.2599466872 - - PREDICTED: protein phosphatase 2C 77 [Jatropha curcas]
15 Hb_094437_060 0.2620311162 - - PREDICTED: cytochrome B5 isoform D-like [Jatropha curcas]
16 Hb_105328_030 0.2671956361 - - Putative retroelement [Oryza sativa Japonica Group]
17 Hb_001591_010 0.2690891077 transcription factor TF Family: MYB myb domain protein [Hevea brasiliensis]
18 Hb_007017_010 0.2694184322 transcription factor TF Family: MYB-related PREDICTED: transcription factor MYB1R1 [Jatropha curcas]
19 Hb_002236_050 0.2711003905 - - -
20 Hb_002374_380 0.2715561416 - - Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 1 [Theobroma cacao]

Gene co-expression network

sample Hb_003750_030 Hb_003750_030 Hb_080147_100 Hb_080147_100 Hb_003750_030--Hb_080147_100 Hb_004208_130 Hb_004208_130 Hb_003750_030--Hb_004208_130 Hb_003226_160 Hb_003226_160 Hb_003750_030--Hb_003226_160 Hb_000116_420 Hb_000116_420 Hb_003750_030--Hb_000116_420 Hb_002798_010 Hb_002798_010 Hb_003750_030--Hb_002798_010 Hb_000139_420 Hb_000139_420 Hb_003750_030--Hb_000139_420 Hb_000805_320 Hb_000805_320 Hb_080147_100--Hb_000805_320 Hb_105328_030 Hb_105328_030 Hb_080147_100--Hb_105328_030 Hb_003073_180 Hb_003073_180 Hb_080147_100--Hb_003073_180 Hb_094437_060 Hb_094437_060 Hb_080147_100--Hb_094437_060 Hb_001504_120 Hb_001504_120 Hb_080147_100--Hb_001504_120 Hb_000297_020 Hb_000297_020 Hb_004208_130--Hb_000297_020 Hb_000907_170 Hb_000907_170 Hb_004208_130--Hb_000907_170 Hb_145084_010 Hb_145084_010 Hb_004208_130--Hb_145084_010 Hb_004931_100 Hb_004931_100 Hb_004208_130--Hb_004931_100 Hb_002138_010 Hb_002138_010 Hb_004208_130--Hb_002138_010 Hb_002609_060 Hb_002609_060 Hb_004208_130--Hb_002609_060 Hb_005333_150 Hb_005333_150 Hb_003226_160--Hb_005333_150 Hb_002896_080 Hb_002896_080 Hb_003226_160--Hb_002896_080 Hb_000243_140 Hb_000243_140 Hb_003226_160--Hb_000243_140 Hb_001863_090 Hb_001863_090 Hb_003226_160--Hb_001863_090 Hb_003226_160--Hb_000907_170 Hb_003226_160--Hb_002798_010 Hb_000252_130 Hb_000252_130 Hb_000116_420--Hb_000252_130 Hb_000454_070 Hb_000454_070 Hb_000116_420--Hb_000454_070 Hb_029888_010 Hb_029888_010 Hb_000116_420--Hb_029888_010 Hb_165071_030 Hb_165071_030 Hb_000116_420--Hb_165071_030 Hb_000116_430 Hb_000116_430 Hb_000116_420--Hb_000116_430 Hb_006922_060 Hb_006922_060 Hb_002798_010--Hb_006922_060 Hb_002798_010--Hb_005333_150 Hb_002798_010--Hb_094437_060 Hb_002236_050 Hb_002236_050 Hb_002798_010--Hb_002236_050 Hb_000331_640 Hb_000331_640 Hb_000139_420--Hb_000331_640 Hb_000086_230 Hb_000086_230 Hb_000139_420--Hb_000086_230 Hb_000258_350 Hb_000258_350 Hb_000139_420--Hb_000258_350 Hb_009265_090 Hb_009265_090 Hb_000139_420--Hb_009265_090 Hb_011671_440 Hb_011671_440 Hb_000139_420--Hb_011671_440 Hb_114893_030 Hb_114893_030 Hb_000139_420--Hb_114893_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.303256 0.182596 0.179705 0.0420264 0.0662587 0.0835891
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.202821 1.43621 0.452561 1.51737 0.168074

CAGE analysis