Hb_001623_320

Information

Type -
Description -
Location Contig1623: 208941-209586
Sequence    

Annotation

kegg
ID rcu:RCOM_1023550
description copper transport protein atox1, putative
nr
ID XP_011047464.1
description PREDICTED: heavy metal-associated isoprenylated plant protein 26 isoform X1 [Populus euphratica]
swissprot
ID Q9SZN7
description Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
trembl
ID B9RWQ4
description Copper transport protein atox1, putative OS=Ricinus communis GN=RCOM_1023550 PE=4 SV=1
Gene Ontology
ID GO:0046872
description heavy metal-associated isoprenylated plant protein 26

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001623_320 0.0 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 isoform X1 [Populus euphratica]
2 Hb_006198_180 0.2326874815 - - PREDICTED: thiamine-repressible mitochondrial transport protein THI74 isoform X1 [Jatropha curcas]
3 Hb_000712_050 0.2375579866 - - PREDICTED: inositol oxygenase 1-like isoform X1 [Citrus sinensis]
4 Hb_001579_310 0.2420429931 - - PREDICTED: pentatricopeptide repeat-containing protein At2g37320 [Jatropha curcas]
5 Hb_005489_100 0.248191262 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000805_250 0.2601147902 - - PREDICTED: rhomboid-like protease 2 [Jatropha curcas]
7 Hb_000690_070 0.2601763016 - - -
8 Hb_001633_170 0.2616240686 - - PREDICTED: aspartokinase 2, chloroplastic-like isoform X1 [Jatropha curcas]
9 Hb_001238_050 0.262902008 - - -
10 Hb_100804_010 0.2634300203 - - BAHD family acyltransferase, clade V, putative [Theobroma cacao]
11 Hb_010142_070 0.2642546765 - - PREDICTED: uncharacterized protein LOC105630659 [Jatropha curcas]
12 Hb_000976_360 0.2653052637 - - PREDICTED: uncharacterized protein LOC105646237 [Jatropha curcas]
13 Hb_168501_010 0.2706831711 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
14 Hb_110390_010 0.2710558622 - - hypothetical protein JCGZ_19741 [Jatropha curcas]
15 Hb_000162_040 0.2714460158 - - PREDICTED: pentatricopeptide repeat-containing protein At2g21090 [Jatropha curcas]
16 Hb_004147_060 0.2727653916 - - PREDICTED: uncharacterized protein LOC105630996 [Jatropha curcas]
17 Hb_183961_010 0.2732466134 - - PREDICTED: inactive rhomboid protein 1 [Cucumis sativus]
18 Hb_000963_180 0.2736927419 - - calcium/calmodulin-dependent protein kinase kinase, putative [Ricinus communis]
19 Hb_011316_060 0.2743192153 - - alpha-l-fucosidase, putative [Ricinus communis]
20 Hb_001153_220 0.2743200357 - - PREDICTED: UDP-galactose/UDP-glucose transporter 2 [Jatropha curcas]

Gene co-expression network

sample Hb_001623_320 Hb_001623_320 Hb_006198_180 Hb_006198_180 Hb_001623_320--Hb_006198_180 Hb_000712_050 Hb_000712_050 Hb_001623_320--Hb_000712_050 Hb_001579_310 Hb_001579_310 Hb_001623_320--Hb_001579_310 Hb_005489_100 Hb_005489_100 Hb_001623_320--Hb_005489_100 Hb_000805_250 Hb_000805_250 Hb_001623_320--Hb_000805_250 Hb_000690_070 Hb_000690_070 Hb_001623_320--Hb_000690_070 Hb_011316_060 Hb_011316_060 Hb_006198_180--Hb_011316_060 Hb_012545_050 Hb_012545_050 Hb_006198_180--Hb_012545_050 Hb_017987_060 Hb_017987_060 Hb_006198_180--Hb_017987_060 Hb_000191_020 Hb_000191_020 Hb_006198_180--Hb_000191_020 Hb_000141_020 Hb_000141_020 Hb_006198_180--Hb_000141_020 Hb_000784_030 Hb_000784_030 Hb_006198_180--Hb_000784_030 Hb_000712_050--Hb_005489_100 Hb_003994_190 Hb_003994_190 Hb_000712_050--Hb_003994_190 Hb_001195_360 Hb_001195_360 Hb_000712_050--Hb_001195_360 Hb_002150_060 Hb_002150_060 Hb_000712_050--Hb_002150_060 Hb_002194_090 Hb_002194_090 Hb_000712_050--Hb_002194_090 Hb_000215_080 Hb_000215_080 Hb_000712_050--Hb_000215_080 Hb_007594_090 Hb_007594_090 Hb_001579_310--Hb_007594_090 Hb_000313_010 Hb_000313_010 Hb_001579_310--Hb_000313_010 Hb_003561_030 Hb_003561_030 Hb_001579_310--Hb_003561_030 Hb_002843_210 Hb_002843_210 Hb_001579_310--Hb_002843_210 Hb_002539_090 Hb_002539_090 Hb_001579_310--Hb_002539_090 Hb_012423_050 Hb_012423_050 Hb_001579_310--Hb_012423_050 Hb_005489_100--Hb_003994_190 Hb_005224_010 Hb_005224_010 Hb_005489_100--Hb_005224_010 Hb_000327_220 Hb_000327_220 Hb_005489_100--Hb_000327_220 Hb_001159_080 Hb_001159_080 Hb_005489_100--Hb_001159_080 Hb_002239_060 Hb_002239_060 Hb_005489_100--Hb_002239_060 Hb_000130_110 Hb_000130_110 Hb_005489_100--Hb_000130_110 Hb_020419_020 Hb_020419_020 Hb_000805_250--Hb_020419_020 Hb_000140_050 Hb_000140_050 Hb_000805_250--Hb_000140_050 Hb_068056_030 Hb_068056_030 Hb_000805_250--Hb_068056_030 Hb_000300_220 Hb_000300_220 Hb_000805_250--Hb_000300_220 Hb_006569_100 Hb_006569_100 Hb_000805_250--Hb_006569_100 Hb_001314_040 Hb_001314_040 Hb_000805_250--Hb_001314_040 Hb_000387_100 Hb_000387_100 Hb_000690_070--Hb_000387_100 Hb_023292_010 Hb_023292_010 Hb_000690_070--Hb_023292_010 Hb_003096_030 Hb_003096_030 Hb_000690_070--Hb_003096_030 Hb_005701_010 Hb_005701_010 Hb_000690_070--Hb_005701_010 Hb_100804_010 Hb_100804_010 Hb_000690_070--Hb_100804_010 Hb_001073_050 Hb_001073_050 Hb_000690_070--Hb_001073_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.634125 0 1.73144 1.26297 0.0721662 3.54248
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.18929 2.9101 6.08401 1.11664 0

CAGE analysis