Hb_000712_050

Information

Type -
Description -
Location Contig712: 97023-99958
Sequence    

Annotation

kegg
ID cit:102618274
description inositol oxygenase 1-like
nr
ID XP_006465721.1
description PREDICTED: inositol oxygenase 1-like isoform X1 [Citrus sinensis]
swissprot
ID Q8L799
description Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1
trembl
ID A0A067EF91
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021944mg PE=4 SV=1
Gene Ontology
ID GO:0005737
description inositol oxygenase 1-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55322: 97223-99947
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000712_050 0.0 - - PREDICTED: inositol oxygenase 1-like isoform X1 [Citrus sinensis]
2 Hb_005489_100 0.1623955691 - - conserved hypothetical protein [Ricinus communis]
3 Hb_003994_190 0.1792236739 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001195_360 0.1874820683 - - PREDICTED: random slug protein 5 [Jatropha curcas]
5 Hb_002150_060 0.1886645342 - - PREDICTED: arabinogalactan peptide 20-like [Jatropha curcas]
6 Hb_002194_090 0.1983826718 - - nucleic acid binding protein, putative [Ricinus communis]
7 Hb_000215_080 0.2004622503 - - PREDICTED: uncharacterized protein LOC105637840 isoform X1 [Jatropha curcas]
8 Hb_000130_110 0.2048144426 - - PREDICTED: TPR repeat-containing thioredoxin TTL1 [Jatropha curcas]
9 Hb_000069_170 0.2051614288 transcription factor TF Family: ARF PREDICTED: auxin response factor 18 [Jatropha curcas]
10 Hb_005542_060 0.2073862805 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
11 Hb_000127_110 0.214389005 - - -
12 Hb_001486_010 0.2181921147 - - adenylsulfate kinase, putative [Ricinus communis]
13 Hb_189216_030 0.2196530898 - - Pleiotropic drug resistance protein, putative [Ricinus communis]
14 Hb_002043_050 0.221286104 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Jatropha curcas]
15 Hb_001662_060 0.221527211 - - SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein isoform 1 [Theobroma cacao]
16 Hb_011377_050 0.2223163712 - - PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X1 [Jatropha curcas]
17 Hb_000108_070 0.2226181343 - - alpha-tubulin 1 [Hevea brasiliensis]
18 Hb_110390_010 0.224946131 - - hypothetical protein JCGZ_19741 [Jatropha curcas]
19 Hb_000130_050 0.2265400165 - - 14-3-3 protein, putative [Ricinus communis]
20 Hb_003540_030 0.2265799075 - - PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000712_050 Hb_000712_050 Hb_005489_100 Hb_005489_100 Hb_000712_050--Hb_005489_100 Hb_003994_190 Hb_003994_190 Hb_000712_050--Hb_003994_190 Hb_001195_360 Hb_001195_360 Hb_000712_050--Hb_001195_360 Hb_002150_060 Hb_002150_060 Hb_000712_050--Hb_002150_060 Hb_002194_090 Hb_002194_090 Hb_000712_050--Hb_002194_090 Hb_000215_080 Hb_000215_080 Hb_000712_050--Hb_000215_080 Hb_005489_100--Hb_003994_190 Hb_005224_010 Hb_005224_010 Hb_005489_100--Hb_005224_010 Hb_000327_220 Hb_000327_220 Hb_005489_100--Hb_000327_220 Hb_001159_080 Hb_001159_080 Hb_005489_100--Hb_001159_080 Hb_002239_060 Hb_002239_060 Hb_005489_100--Hb_002239_060 Hb_000130_110 Hb_000130_110 Hb_005489_100--Hb_000130_110 Hb_000111_450 Hb_000111_450 Hb_003994_190--Hb_000111_450 Hb_001279_340 Hb_001279_340 Hb_003994_190--Hb_001279_340 Hb_005928_100 Hb_005928_100 Hb_003994_190--Hb_005928_100 Hb_003994_190--Hb_000130_110 Hb_000340_310 Hb_000340_310 Hb_003994_190--Hb_000340_310 Hb_002043_050 Hb_002043_050 Hb_003994_190--Hb_002043_050 Hb_001195_360--Hb_000130_110 Hb_001195_360--Hb_003994_190 Hb_001195_360--Hb_002043_050 Hb_002205_130 Hb_002205_130 Hb_001195_360--Hb_002205_130 Hb_009005_050 Hb_009005_050 Hb_001195_360--Hb_009005_050 Hb_012799_100 Hb_012799_100 Hb_001195_360--Hb_012799_100 Hb_002150_060--Hb_000130_110 Hb_002150_060--Hb_003994_190 Hb_001545_100 Hb_001545_100 Hb_002150_060--Hb_001545_100 Hb_001096_110 Hb_001096_110 Hb_002150_060--Hb_001096_110 Hb_006153_080 Hb_006153_080 Hb_002150_060--Hb_006153_080 Hb_000069_170 Hb_000069_170 Hb_002194_090--Hb_000069_170 Hb_000130_050 Hb_000130_050 Hb_002194_090--Hb_000130_050 Hb_000805_290 Hb_000805_290 Hb_002194_090--Hb_000805_290 Hb_001662_060 Hb_001662_060 Hb_002194_090--Hb_001662_060 Hb_003680_190 Hb_003680_190 Hb_002194_090--Hb_003680_190 Hb_002272_280 Hb_002272_280 Hb_002194_090--Hb_002272_280 Hb_031862_130 Hb_031862_130 Hb_000215_080--Hb_031862_130 Hb_008695_140 Hb_008695_140 Hb_000215_080--Hb_008695_140 Hb_001946_410 Hb_001946_410 Hb_000215_080--Hb_001946_410 Hb_005285_020 Hb_005285_020 Hb_000215_080--Hb_005285_020 Hb_005542_060 Hb_005542_060 Hb_000215_080--Hb_005542_060 Hb_000215_080--Hb_000069_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.680687 0.860251 5.91882 4.13777 1.83373 3.55825
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.02023 4.89522 17.1377 2.66032 0.63014

CAGE analysis