Hb_000690_070

Information

Type -
Description -
Location Contig690: 94403-97900
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000690_070 0.0 - - -
2 Hb_000387_100 0.1649813487 - - -
3 Hb_023292_010 0.1736700296 - - Cucumisin precursor, putative [Ricinus communis]
4 Hb_003096_030 0.1783604259 - - PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Jatropha curcas]
5 Hb_005701_010 0.1819728115 - - PREDICTED: uncharacterized protein LOC105633877 isoform X1 [Jatropha curcas]
6 Hb_100804_010 0.1880687453 - - BAHD family acyltransferase, clade V, putative [Theobroma cacao]
7 Hb_001073_050 0.1882183178 - - -
8 Hb_003147_050 0.1905867163 - - nucleic acid binding protein, putative [Ricinus communis]
9 Hb_001616_120 0.1926053752 - - -
10 Hb_002290_040 0.2066709224 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001153_220 0.2067016428 - - PREDICTED: UDP-galactose/UDP-glucose transporter 2 [Jatropha curcas]
12 Hb_004553_020 0.2088076115 - - PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Jatropha curcas]
13 Hb_001006_260 0.2098360327 - - PREDICTED: eukaryotic translation initiation factor 3 subunit I-like [Jatropha curcas]
14 Hb_001357_080 0.2112499052 - - hypothetical protein POPTR_0005s15590g [Populus trichocarpa]
15 Hb_004324_050 0.211889489 - - PREDICTED: spermine synthase [Jatropha curcas]
16 Hb_001173_040 0.2145645778 - - PREDICTED: tryptophan--tRNA ligase, cytoplasmic [Jatropha curcas]
17 Hb_000976_360 0.215688478 - - PREDICTED: uncharacterized protein LOC105646237 [Jatropha curcas]
18 Hb_001633_170 0.2165478595 - - PREDICTED: aspartokinase 2, chloroplastic-like isoform X1 [Jatropha curcas]
19 Hb_001221_510 0.2198319772 - - Protein HVA22, putative [Ricinus communis]
20 Hb_002603_160 0.2216722366 - - Arginyl-tRNA--protein transferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000690_070 Hb_000690_070 Hb_000387_100 Hb_000387_100 Hb_000690_070--Hb_000387_100 Hb_023292_010 Hb_023292_010 Hb_000690_070--Hb_023292_010 Hb_003096_030 Hb_003096_030 Hb_000690_070--Hb_003096_030 Hb_005701_010 Hb_005701_010 Hb_000690_070--Hb_005701_010 Hb_100804_010 Hb_100804_010 Hb_000690_070--Hb_100804_010 Hb_001073_050 Hb_001073_050 Hb_000690_070--Hb_001073_050 Hb_001221_510 Hb_001221_510 Hb_000387_100--Hb_001221_510 Hb_000387_100--Hb_003096_030 Hb_001396_220 Hb_001396_220 Hb_000387_100--Hb_001396_220 Hb_000329_600 Hb_000329_600 Hb_000387_100--Hb_000329_600 Hb_000567_250 Hb_000567_250 Hb_000387_100--Hb_000567_250 Hb_023292_010--Hb_001073_050 Hb_001357_080 Hb_001357_080 Hb_023292_010--Hb_001357_080 Hb_003018_190 Hb_003018_190 Hb_023292_010--Hb_003018_190 Hb_002603_160 Hb_002603_160 Hb_023292_010--Hb_002603_160 Hb_006935_050 Hb_006935_050 Hb_023292_010--Hb_006935_050 Hb_023292_010--Hb_100804_010 Hb_003147_050 Hb_003147_050 Hb_003096_030--Hb_003147_050 Hb_012423_050 Hb_012423_050 Hb_003096_030--Hb_012423_050 Hb_003096_030--Hb_005701_010 Hb_001538_140 Hb_001538_140 Hb_003096_030--Hb_001538_140 Hb_002290_040 Hb_002290_040 Hb_003096_030--Hb_002290_040 Hb_001427_230 Hb_001427_230 Hb_003096_030--Hb_001427_230 Hb_000563_550 Hb_000563_550 Hb_005701_010--Hb_000563_550 Hb_005701_010--Hb_002603_160 Hb_002551_020 Hb_002551_020 Hb_005701_010--Hb_002551_020 Hb_005188_090 Hb_005188_090 Hb_005701_010--Hb_005188_090 Hb_000069_460 Hb_000069_460 Hb_005701_010--Hb_000069_460 Hb_005701_010--Hb_003147_050 Hb_100804_010--Hb_001073_050 Hb_006472_050 Hb_006472_050 Hb_100804_010--Hb_006472_050 Hb_001153_220 Hb_001153_220 Hb_100804_010--Hb_001153_220 Hb_100804_010--Hb_001357_080 Hb_000363_160 Hb_000363_160 Hb_100804_010--Hb_000363_160 Hb_010436_060 Hb_010436_060 Hb_001073_050--Hb_010436_060 Hb_004056_030 Hb_004056_030 Hb_001073_050--Hb_004056_030 Hb_001073_050--Hb_002603_160 Hb_064441_010 Hb_064441_010 Hb_001073_050--Hb_064441_010 Hb_001073_050--Hb_001357_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.105627 0 0.0673776 0.0444903 0.123012 0.718745
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.483304 0.379857 1.20095 0.186614 0.147704

CAGE analysis