Hb_001584_280

Information

Type -
Description -
Location Contig1584: 160037-160399
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa019963mg
description hypothetical protein
nr
ID XP_012088849.1
description PREDICTED: uncharacterized protein LOC105647395 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JUY6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23187 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001584_280 0.0 - - PREDICTED: uncharacterized protein LOC105647395 [Jatropha curcas]
2 Hb_000014_210 0.1290059042 - - amine oxidase, partial [Aphanizomenon flos-aquae]
3 Hb_000820_110 0.1414854825 - - UDP-XYL synthase 6 isoform 1 [Theobroma cacao]
4 Hb_000193_210 0.1433940267 - - PREDICTED: LOW QUALITY PROTEIN: galactoside 2-alpha-L-fucosyltransferase [Jatropha curcas]
5 Hb_001951_080 0.1473410597 - - O-acetyltransferase, putative [Ricinus communis]
6 Hb_005784_010 0.1511530805 - - PREDICTED: uncharacterized protein LOC105645175 [Jatropha curcas]
7 Hb_000297_140 0.1540736042 - - hypothetical protein RCOM_0293450 [Ricinus communis]
8 Hb_000922_400 0.1547254622 - - PREDICTED: uncharacterized protein LOC105640363 [Jatropha curcas]
9 Hb_003097_160 0.1549924992 - - PREDICTED: F-box/WD repeat-containing protein sel-10 [Jatropha curcas]
10 Hb_003177_040 0.1561289148 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
11 Hb_000997_080 0.1570436274 - - PREDICTED: protein WVD2-like 1 isoform X1 [Jatropha curcas]
12 Hb_001819_020 0.1600029521 - - PREDICTED: uncharacterized protein LOC105641890 isoform X1 [Jatropha curcas]
13 Hb_002471_130 0.1622707108 - - PREDICTED: probable transmembrane ascorbate ferrireductase 3 [Jatropha curcas]
14 Hb_064546_010 0.1634881809 - - PREDICTED: peroxidase 3 [Jatropha curcas]
15 Hb_006693_040 0.1651436237 - - PREDICTED: homeotic protein female sterile-like [Jatropha curcas]
16 Hb_019516_070 0.1658569975 - - PREDICTED: uncharacterized protein LOC105634258 [Jatropha curcas]
17 Hb_006002_050 0.1663584415 - - PREDICTED: uncharacterized protein LOC105638083 [Jatropha curcas]
18 Hb_000345_550 0.1676520456 - - PREDICTED: uncharacterized protein LOC105629456 [Jatropha curcas]
19 Hb_001159_230 0.1717613063 - - Kinesin heavy chain, putative [Ricinus communis]
20 Hb_000003_280 0.1721041219 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001584_280 Hb_001584_280 Hb_000014_210 Hb_000014_210 Hb_001584_280--Hb_000014_210 Hb_000820_110 Hb_000820_110 Hb_001584_280--Hb_000820_110 Hb_000193_210 Hb_000193_210 Hb_001584_280--Hb_000193_210 Hb_001951_080 Hb_001951_080 Hb_001584_280--Hb_001951_080 Hb_005784_010 Hb_005784_010 Hb_001584_280--Hb_005784_010 Hb_000297_140 Hb_000297_140 Hb_001584_280--Hb_000297_140 Hb_000160_010 Hb_000160_010 Hb_000014_210--Hb_000160_010 Hb_001688_050 Hb_001688_050 Hb_000014_210--Hb_001688_050 Hb_001276_030 Hb_001276_030 Hb_000014_210--Hb_001276_030 Hb_004586_440 Hb_004586_440 Hb_000014_210--Hb_004586_440 Hb_007760_020 Hb_007760_020 Hb_000014_210--Hb_007760_020 Hb_000820_110--Hb_000297_140 Hb_000820_110--Hb_000193_210 Hb_019516_070 Hb_019516_070 Hb_000820_110--Hb_019516_070 Hb_019516_060 Hb_019516_060 Hb_000820_110--Hb_019516_060 Hb_006750_010 Hb_006750_010 Hb_000820_110--Hb_006750_010 Hb_000077_100 Hb_000077_100 Hb_000820_110--Hb_000077_100 Hb_000193_210--Hb_000077_100 Hb_003177_040 Hb_003177_040 Hb_000193_210--Hb_003177_040 Hb_001493_060 Hb_001493_060 Hb_000193_210--Hb_001493_060 Hb_000108_180 Hb_000108_180 Hb_000193_210--Hb_000108_180 Hb_003462_040 Hb_003462_040 Hb_000193_210--Hb_003462_040 Hb_012484_050 Hb_012484_050 Hb_001951_080--Hb_012484_050 Hb_001951_080--Hb_005784_010 Hb_000345_550 Hb_000345_550 Hb_001951_080--Hb_000345_550 Hb_001486_280 Hb_001486_280 Hb_001951_080--Hb_001486_280 Hb_003097_160 Hb_003097_160 Hb_001951_080--Hb_003097_160 Hb_003125_210 Hb_003125_210 Hb_001951_080--Hb_003125_210 Hb_005784_010--Hb_000345_550 Hb_007904_280 Hb_007904_280 Hb_005784_010--Hb_007904_280 Hb_004223_060 Hb_004223_060 Hb_005784_010--Hb_004223_060 Hb_001819_020 Hb_001819_020 Hb_005784_010--Hb_001819_020 Hb_009783_010 Hb_009783_010 Hb_005784_010--Hb_009783_010 Hb_006002_050 Hb_006002_050 Hb_000297_140--Hb_006002_050 Hb_030565_100 Hb_030565_100 Hb_000297_140--Hb_030565_100 Hb_000997_080 Hb_000997_080 Hb_000297_140--Hb_000997_080 Hb_000011_280 Hb_000011_280 Hb_000297_140--Hb_000011_280 Hb_007574_040 Hb_007574_040 Hb_000297_140--Hb_007574_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.101608 0.200481 1.52479 4.6267 0.0960106 0.28044
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.241967 0 0 0.250075 2.25605

CAGE analysis