Hb_000014_210

Information

Type -
Description -
Location Contig14: 385618-386020
Sequence    

Annotation

kegg
ID -
description -
nr
ID WP_039200098.1
description amine oxidase, partial [Aphanizomenon flos-aquae]
swissprot
ID -
description -
trembl
ID A0A0B0QRC6
description Amine oxidase (Fragment) OS=Aphanizomenon flos-aquae 2012/KM1/D3 GN=OA07_02645 PE=4 SV=1
Gene Ontology
ID GO:0016491
description phytoene desaturase 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10803: 376899-386071
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000014_210 0.0 - - amine oxidase, partial [Aphanizomenon flos-aquae]
2 Hb_001584_280 0.1290059042 - - PREDICTED: uncharacterized protein LOC105647395 [Jatropha curcas]
3 Hb_000160_010 0.1618252415 - - PREDICTED: uncharacterized protein LOC105638816 [Jatropha curcas]
4 Hb_001688_050 0.1725284576 - - PREDICTED: reticulon-like protein B9 [Jatropha curcas]
5 Hb_001276_030 0.1728257219 - - PREDICTED: uncharacterized protein LOC104881333 [Vitis vinifera]
6 Hb_004586_440 0.1765877188 - - Blue copper protein precursor, putative [Ricinus communis]
7 Hb_007760_020 0.1796057015 - - PREDICTED: expansin-A1 [Populus euphratica]
8 Hb_001357_290 0.1797787289 - - PREDICTED: uncharacterized protein LOC105632986 [Jatropha curcas]
9 Hb_001232_060 0.1800517075 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001269_180 0.1808476452 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
11 Hb_009151_010 0.182819796 - - Peroxidase 3 [Morus notabilis]
12 Hb_003177_040 0.1828608426 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
13 Hb_001789_100 0.1848335452 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002081_020 0.1851139054 transcription factor TF Family: LIM Cysteine and glycine-rich protein, putative [Ricinus communis]
15 Hb_050160_010 0.1862413285 - - hypothetical protein JCGZ_24934 [Jatropha curcas]
16 Hb_000108_180 0.1863452372 - - PREDICTED: uncharacterized protein LOC105630021 [Jatropha curcas]
17 Hb_001001_070 0.1874414339 - - PREDICTED: uncharacterized protein LOC105633663 [Jatropha curcas]
18 Hb_005183_130 0.1876895882 - - glycogenin, putative [Ricinus communis]
19 Hb_000130_350 0.1883332999 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
20 Hb_000176_080 0.1888756906 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Jatropha curcas]

Gene co-expression network

sample Hb_000014_210 Hb_000014_210 Hb_001584_280 Hb_001584_280 Hb_000014_210--Hb_001584_280 Hb_000160_010 Hb_000160_010 Hb_000014_210--Hb_000160_010 Hb_001688_050 Hb_001688_050 Hb_000014_210--Hb_001688_050 Hb_001276_030 Hb_001276_030 Hb_000014_210--Hb_001276_030 Hb_004586_440 Hb_004586_440 Hb_000014_210--Hb_004586_440 Hb_007760_020 Hb_007760_020 Hb_000014_210--Hb_007760_020 Hb_000820_110 Hb_000820_110 Hb_001584_280--Hb_000820_110 Hb_000193_210 Hb_000193_210 Hb_001584_280--Hb_000193_210 Hb_001951_080 Hb_001951_080 Hb_001584_280--Hb_001951_080 Hb_005784_010 Hb_005784_010 Hb_001584_280--Hb_005784_010 Hb_000297_140 Hb_000297_140 Hb_001584_280--Hb_000297_140 Hb_000160_010--Hb_001276_030 Hb_001269_180 Hb_001269_180 Hb_000160_010--Hb_001269_180 Hb_001232_060 Hb_001232_060 Hb_000160_010--Hb_001232_060 Hb_001369_480 Hb_001369_480 Hb_000160_010--Hb_001369_480 Hb_000160_010--Hb_004586_440 Hb_000633_030 Hb_000633_030 Hb_000160_010--Hb_000633_030 Hb_000103_440 Hb_000103_440 Hb_001688_050--Hb_000103_440 Hb_001289_070 Hb_001289_070 Hb_001688_050--Hb_001289_070 Hb_015807_130 Hb_015807_130 Hb_001688_050--Hb_015807_130 Hb_003058_240 Hb_003058_240 Hb_001688_050--Hb_003058_240 Hb_000813_070 Hb_000813_070 Hb_001688_050--Hb_000813_070 Hb_004650_110 Hb_004650_110 Hb_001688_050--Hb_004650_110 Hb_001276_030--Hb_000633_030 Hb_001276_030--Hb_001232_060 Hb_001276_030--Hb_001269_180 Hb_001456_030 Hb_001456_030 Hb_001276_030--Hb_001456_030 Hb_011082_030 Hb_011082_030 Hb_001276_030--Hb_011082_030 Hb_000608_090 Hb_000608_090 Hb_004586_440--Hb_000608_090 Hb_004586_440--Hb_001369_480 Hb_000362_030 Hb_000362_030 Hb_004586_440--Hb_000362_030 Hb_071079_040 Hb_071079_040 Hb_004586_440--Hb_071079_040 Hb_031330_010 Hb_031330_010 Hb_004586_440--Hb_031330_010 Hb_011224_070 Hb_011224_070 Hb_004586_440--Hb_011224_070 Hb_005116_150 Hb_005116_150 Hb_007760_020--Hb_005116_150 Hb_009151_010 Hb_009151_010 Hb_007760_020--Hb_009151_010 Hb_010142_060 Hb_010142_060 Hb_007760_020--Hb_010142_060 Hb_001534_140 Hb_001534_140 Hb_007760_020--Hb_001534_140 Hb_009252_070 Hb_009252_070 Hb_007760_020--Hb_009252_070 Hb_000531_030 Hb_000531_030 Hb_007760_020--Hb_000531_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.199312 0.238954 1.26959 7.67986 0 0.387825
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.466786 0 0 0.172018 3.7807

CAGE analysis