Hb_000531_030

Information

Type -
Description -
Location Contig531: 60374-68203
Sequence    

Annotation

kegg
ID rcu:RCOM_0903660
description hypothetical protein
nr
ID XP_002518438.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9SV71
description Cytochrome b561 and DOMON domain-containing protein At4g12980 OS=Arabidopsis thaliana GN=At4g12980 PE=2 SV=1
trembl
ID B9RXG9
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0903660 PE=4 SV=1
Gene Ontology
ID GO:0016021
description cytochrome b561 and domon domain-containing protein at5g35735-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000531_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001104_060 0.0539067444 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
3 Hb_005440_040 0.0744017847 - - PREDICTED: microtubule-associated protein 70-5 [Jatropha curcas]
4 Hb_000227_360 0.0745997291 - - PREDICTED: mavicyanin [Jatropha curcas]
5 Hb_009151_010 0.08182042 - - Peroxidase 3 [Morus notabilis]
6 Hb_001456_030 0.0829314376 - - PREDICTED: bifunctional pinoresinol-lariciresinol reductase 2 [Vitis vinifera]
7 Hb_005116_150 0.0840833433 - - PREDICTED: cyclin-P3-1 isoform X2 [Jatropha curcas]
8 Hb_003858_010 0.0841538743 - - xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum]
9 Hb_000699_220 0.0842627673 - - PREDICTED: phospholipid-metabolizing enzyme A-C1-like [Jatropha curcas]
10 Hb_006717_060 0.0845432247 - - PREDICTED: peroxidase 42 [Jatropha curcas]
11 Hb_108090_010 0.0854554343 - - conserved hypothetical protein [Ricinus communis]
12 Hb_006977_010 0.087364037 - - unnamed protein product [Vitis vinifera]
13 Hb_011344_040 0.0880205697 - - PREDICTED: 21 kDa protein [Jatropha curcas]
14 Hb_000336_120 0.0887385907 - - PREDICTED: mavicyanin [Populus euphratica]
15 Hb_007113_060 0.0902324036 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]
16 Hb_006922_120 0.0922540038 - - hypothetical protein JCGZ_01146 [Jatropha curcas]
17 Hb_012114_090 0.0927160976 - - tubulin beta chain, putative [Ricinus communis]
18 Hb_005295_030 0.0946688197 - - PREDICTED: uncharacterized protein LOC105645488 [Jatropha curcas]
19 Hb_015175_070 0.0951683951 - - cysteine protease, putative [Ricinus communis]
20 Hb_132381_010 0.0954705041 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000531_030 Hb_000531_030 Hb_001104_060 Hb_001104_060 Hb_000531_030--Hb_001104_060 Hb_005440_040 Hb_005440_040 Hb_000531_030--Hb_005440_040 Hb_000227_360 Hb_000227_360 Hb_000531_030--Hb_000227_360 Hb_009151_010 Hb_009151_010 Hb_000531_030--Hb_009151_010 Hb_001456_030 Hb_001456_030 Hb_000531_030--Hb_001456_030 Hb_005116_150 Hb_005116_150 Hb_000531_030--Hb_005116_150 Hb_011224_070 Hb_011224_070 Hb_001104_060--Hb_011224_070 Hb_003376_060 Hb_003376_060 Hb_001104_060--Hb_003376_060 Hb_001104_060--Hb_001456_030 Hb_000699_220 Hb_000699_220 Hb_001104_060--Hb_000699_220 Hb_001104_060--Hb_000227_360 Hb_005440_040--Hb_000227_360 Hb_007113_060 Hb_007113_060 Hb_005440_040--Hb_007113_060 Hb_006922_120 Hb_006922_120 Hb_005440_040--Hb_006922_120 Hb_003858_010 Hb_003858_010 Hb_005440_040--Hb_003858_010 Hb_108090_010 Hb_108090_010 Hb_005440_040--Hb_108090_010 Hb_000227_360--Hb_108090_010 Hb_000227_360--Hb_003858_010 Hb_000227_360--Hb_001456_030 Hb_011344_040 Hb_011344_040 Hb_000227_360--Hb_011344_040 Hb_001357_290 Hb_001357_290 Hb_000227_360--Hb_001357_290 Hb_002311_030 Hb_002311_030 Hb_009151_010--Hb_002311_030 Hb_004162_200 Hb_004162_200 Hb_009151_010--Hb_004162_200 Hb_009151_010--Hb_005116_150 Hb_002067_070 Hb_002067_070 Hb_009151_010--Hb_002067_070 Hb_009151_010--Hb_007113_060 Hb_005616_020 Hb_005616_020 Hb_001456_030--Hb_005616_020 Hb_001456_030--Hb_003376_060 Hb_000462_120 Hb_000462_120 Hb_001456_030--Hb_000462_120 Hb_000964_080 Hb_000964_080 Hb_001456_030--Hb_000964_080 Hb_007760_020 Hb_007760_020 Hb_005116_150--Hb_007760_020 Hb_005116_150--Hb_007113_060 Hb_005116_150--Hb_002311_030 Hb_010142_060 Hb_010142_060 Hb_005116_150--Hb_010142_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0361451 0.278399 1.4017 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0130213 0.537562

CAGE analysis