Hb_001114_030

Information

Type -
Description -
Location Contig1114: 18606-19354
Sequence    

Annotation

kegg
ID dosa:Os12t0559300-00
description Os12g0559300; Similar to Leucine Rich Repeat family protein.
nr
ID BAP28224.1
description Brown planthopper resistance protein [Oryza sativa Indica Group]
swissprot
ID -
description -
trembl
ID W5GPB1
description Uncharacterized protein OS=Triticum aestivum PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001114_030 0.0 - - Brown planthopper resistance protein [Oryza sativa Indica Group]
2 Hb_000646_020 0.1944651803 - - putative gag protein [Coffea canephora]
3 Hb_076233_010 0.267323926 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000008_040 0.2712705326 - - hypothetical protein POPTR_0009s01550g [Populus trichocarpa]
5 Hb_001794_080 0.2736371978 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000936_040 0.2760082062 - - hypothetical protein JCGZ_00046 [Jatropha curcas]
7 Hb_000805_330 0.2780156055 - - PREDICTED: ricin-like [Elaeis guineensis]
8 Hb_002498_210 0.2790438574 - - SKU5 similar 4 isoform 3 [Theobroma cacao]
9 Hb_001147_090 0.2869412222 transcription factor TF Family: GRAS DELLA protein GAI1, putative [Ricinus communis]
10 Hb_000321_010 0.2971636735 - - Chitinase 1 precursor, putative [Ricinus communis]
11 Hb_102129_010 0.3099294035 - - multicopper oxidase, putative [Ricinus communis]
12 Hb_000184_140 0.3125367119 - - conserved hypothetical protein [Ricinus communis]
13 Hb_026620_010 0.315039978 - - -
14 Hb_119600_020 0.3244426679 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
15 Hb_005001_010 0.3262194098 - - GAST1 protein precursor, putative [Ricinus communis]
16 Hb_000663_030 0.3263951647 - - -
17 Hb_000003_430 0.3293533019 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
18 Hb_002078_210 0.3311193349 - - PREDICTED: cytochrome P450 78A5-like [Jatropha curcas]
19 Hb_001147_080 0.3338567018 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_010810_040 0.3339429196 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]

Gene co-expression network

sample Hb_001114_030 Hb_001114_030 Hb_000646_020 Hb_000646_020 Hb_001114_030--Hb_000646_020 Hb_076233_010 Hb_076233_010 Hb_001114_030--Hb_076233_010 Hb_000008_040 Hb_000008_040 Hb_001114_030--Hb_000008_040 Hb_001794_080 Hb_001794_080 Hb_001114_030--Hb_001794_080 Hb_000936_040 Hb_000936_040 Hb_001114_030--Hb_000936_040 Hb_000805_330 Hb_000805_330 Hb_001114_030--Hb_000805_330 Hb_000646_020--Hb_076233_010 Hb_002498_210 Hb_002498_210 Hb_000646_020--Hb_002498_210 Hb_000646_020--Hb_001794_080 Hb_000184_140 Hb_000184_140 Hb_000646_020--Hb_000184_140 Hb_026620_010 Hb_026620_010 Hb_000646_020--Hb_026620_010 Hb_076233_010--Hb_026620_010 Hb_076233_010--Hb_000184_140 Hb_119600_020 Hb_119600_020 Hb_076233_010--Hb_119600_020 Hb_020805_160 Hb_020805_160 Hb_076233_010--Hb_020805_160 Hb_007545_200 Hb_007545_200 Hb_076233_010--Hb_007545_200 Hb_000008_040--Hb_000805_330 Hb_002869_040 Hb_002869_040 Hb_000008_040--Hb_002869_040 Hb_064773_010 Hb_064773_010 Hb_000008_040--Hb_064773_010 Hb_000120_100 Hb_000120_100 Hb_000008_040--Hb_000120_100 Hb_004668_030 Hb_004668_030 Hb_000008_040--Hb_004668_030 Hb_020301_050 Hb_020301_050 Hb_000008_040--Hb_020301_050 Hb_005839_070 Hb_005839_070 Hb_001794_080--Hb_005839_070 Hb_010374_010 Hb_010374_010 Hb_001794_080--Hb_010374_010 Hb_003453_070 Hb_003453_070 Hb_001794_080--Hb_003453_070 Hb_000770_020 Hb_000770_020 Hb_001794_080--Hb_000770_020 Hb_011045_020 Hb_011045_020 Hb_001794_080--Hb_011045_020 Hb_000302_050 Hb_000302_050 Hb_001794_080--Hb_000302_050 Hb_004611_060 Hb_004611_060 Hb_000936_040--Hb_004611_060 Hb_009476_150 Hb_009476_150 Hb_000936_040--Hb_009476_150 Hb_000438_150 Hb_000438_150 Hb_000936_040--Hb_000438_150 Hb_048944_020 Hb_048944_020 Hb_000936_040--Hb_048944_020 Hb_035761_010 Hb_035761_010 Hb_000936_040--Hb_035761_010 Hb_049958_010 Hb_049958_010 Hb_000936_040--Hb_049958_010 Hb_007304_100 Hb_007304_100 Hb_000805_330--Hb_007304_100 Hb_000318_320 Hb_000318_320 Hb_000805_330--Hb_000318_320 Hb_008725_190 Hb_008725_190 Hb_000805_330--Hb_008725_190 Hb_005183_010 Hb_005183_010 Hb_000805_330--Hb_005183_010 Hb_007007_110 Hb_007007_110 Hb_000805_330--Hb_007007_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0750287 0.229037 0 0.186793 0.0377199 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis