Hb_064773_010

Information

Type -
Description -
Location Contig64773: 11-700
Sequence    

Annotation

kegg
ID pda:103699620
description uncharacterized LOC103699620
nr
ID XP_008779857.1
description PREDICTED: uncharacterized protein LOC103699620, partial [Phoenix dactylifera]
swissprot
ID -
description -
trembl
ID A0A061EWB4
description Uncharacterized protein OS=Theobroma cacao GN=TCM_023639 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_064773_010 0.0 - - PREDICTED: uncharacterized protein LOC103699620, partial [Phoenix dactylifera]
2 Hb_000120_100 0.0030269503 - - -
3 Hb_004668_030 0.0097074046 - - PREDICTED: vacuolar amino acid transporter 1-like [Jatropha curcas]
4 Hb_020301_050 0.0102372474 - - conserved hypothetical protein [Ricinus communis]
5 Hb_041849_010 0.0123227142 - - beta-glucosidase, putative [Ricinus communis]
6 Hb_078439_010 0.0134285944 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
7 Hb_022264_010 0.031289636 - - PREDICTED: uncharacterized protein LOC105795741 [Gossypium raimondii]
8 Hb_169511_020 0.0358150297 - - PREDICTED: uncharacterized protein LOC105037523, partial [Elaeis guineensis]
9 Hb_003910_030 0.040141108 - - PREDICTED: probable disease resistance protein At5g66910 [Populus euphratica]
10 Hb_000953_160 0.0405445174 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Ricinus communis]
11 Hb_061641_010 0.0420596566 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
12 Hb_004077_010 0.0447125689 - - retinoblastoma-binding protein, putative [Ricinus communis]
13 Hb_103659_010 0.0455775184 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001975_060 0.0529489069 - - hypothetical protein JCGZ_11079 [Jatropha curcas]
15 Hb_003453_070 0.0644306918 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor LEP [Jatropha curcas]
16 Hb_005839_070 0.0686380519 - - hypothetical protein POPTR_0013s08160g [Populus trichocarpa]
17 Hb_010374_010 0.0691266294 - - TMV resistance protein N, putative [Ricinus communis]
18 Hb_000259_100 0.0747386894 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
19 Hb_000770_020 0.0766082563 - - hypothetical protein POPTR_0001s39195g [Populus trichocarpa]
20 Hb_011045_020 0.0777288994 - - hypothetical protein CICLE_v100140161mg, partial [Citrus clementina]

Gene co-expression network

sample Hb_064773_010 Hb_064773_010 Hb_000120_100 Hb_000120_100 Hb_064773_010--Hb_000120_100 Hb_004668_030 Hb_004668_030 Hb_064773_010--Hb_004668_030 Hb_020301_050 Hb_020301_050 Hb_064773_010--Hb_020301_050 Hb_041849_010 Hb_041849_010 Hb_064773_010--Hb_041849_010 Hb_078439_010 Hb_078439_010 Hb_064773_010--Hb_078439_010 Hb_022264_010 Hb_022264_010 Hb_064773_010--Hb_022264_010 Hb_000120_100--Hb_004668_030 Hb_000120_100--Hb_020301_050 Hb_000120_100--Hb_078439_010 Hb_000120_100--Hb_041849_010 Hb_169511_020 Hb_169511_020 Hb_000120_100--Hb_169511_020 Hb_004668_030--Hb_020301_050 Hb_004668_030--Hb_078439_010 Hb_004668_030--Hb_041849_010 Hb_004668_030--Hb_169511_020 Hb_020301_050--Hb_078439_010 Hb_020301_050--Hb_041849_010 Hb_020301_050--Hb_169511_020 Hb_041849_010--Hb_022264_010 Hb_041849_010--Hb_078439_010 Hb_078439_010--Hb_169511_020 Hb_022264_010--Hb_000120_100 Hb_022264_010--Hb_004668_030 Hb_022264_010--Hb_020301_050 Hb_000259_100 Hb_000259_100 Hb_022264_010--Hb_000259_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0324971 0 0.0395423 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis