Hb_041849_010

Information

Type -
Description -
Location Contig41849: 249-618
Sequence    

Annotation

kegg
ID rcu:RCOM_1769070
description beta-glucosidase, putative (EC:3.2.1.21)
nr
ID XP_002512138.1
description beta-glucosidase, putative [Ricinus communis]
swissprot
ID Q7XKV2
description Beta-glucosidase 13 OS=Oryza sativa subsp. japonica GN=BGLU13 PE=2 SV=2
trembl
ID B9REG9
description Beta-glucosidase, putative OS=Ricinus communis GN=RCOM_1769070 PE=3 SV=1
Gene Ontology
ID GO:0008422
description beta-glucosidase 12-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_041849_010 0.0 - - beta-glucosidase, putative [Ricinus communis]
2 Hb_064773_010 0.0123227142 - - PREDICTED: uncharacterized protein LOC103699620, partial [Phoenix dactylifera]
3 Hb_000120_100 0.0153494617 - - -
4 Hb_022264_010 0.0189695463 - - PREDICTED: uncharacterized protein LOC105795741 [Gossypium raimondii]
5 Hb_004668_030 0.0220291872 - - PREDICTED: vacuolar amino acid transporter 1-like [Jatropha curcas]
6 Hb_020301_050 0.0225589557 - - conserved hypothetical protein [Ricinus communis]
7 Hb_078439_010 0.0257498039 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
8 Hb_169511_020 0.0481302884 - - PREDICTED: uncharacterized protein LOC105037523, partial [Elaeis guineensis]
9 Hb_003910_030 0.0524547249 - - PREDICTED: probable disease resistance protein At5g66910 [Populus euphratica]
10 Hb_000953_160 0.0528579731 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Ricinus communis]
11 Hb_061641_010 0.0543724946 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
12 Hb_004077_010 0.0570242786 - - retinoblastoma-binding protein, putative [Ricinus communis]
13 Hb_103659_010 0.0578888473 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000259_100 0.0624370287 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
15 Hb_001975_060 0.0652567345 - - hypothetical protein JCGZ_11079 [Jatropha curcas]
16 Hb_003453_070 0.0767321522 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor LEP [Jatropha curcas]
17 Hb_005839_070 0.0809369008 - - hypothetical protein POPTR_0013s08160g [Populus trichocarpa]
18 Hb_010374_010 0.0814251654 - - TMV resistance protein N, putative [Ricinus communis]
19 Hb_000115_260 0.0844426631 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH75 [Vitis vinifera]
20 Hb_005511_070 0.0860278881 - - -

Gene co-expression network

sample Hb_041849_010 Hb_041849_010 Hb_064773_010 Hb_064773_010 Hb_041849_010--Hb_064773_010 Hb_000120_100 Hb_000120_100 Hb_041849_010--Hb_000120_100 Hb_022264_010 Hb_022264_010 Hb_041849_010--Hb_022264_010 Hb_004668_030 Hb_004668_030 Hb_041849_010--Hb_004668_030 Hb_020301_050 Hb_020301_050 Hb_041849_010--Hb_020301_050 Hb_078439_010 Hb_078439_010 Hb_041849_010--Hb_078439_010 Hb_064773_010--Hb_000120_100 Hb_064773_010--Hb_004668_030 Hb_064773_010--Hb_020301_050 Hb_064773_010--Hb_078439_010 Hb_064773_010--Hb_022264_010 Hb_000120_100--Hb_004668_030 Hb_000120_100--Hb_020301_050 Hb_000120_100--Hb_078439_010 Hb_169511_020 Hb_169511_020 Hb_000120_100--Hb_169511_020 Hb_022264_010--Hb_000120_100 Hb_022264_010--Hb_004668_030 Hb_022264_010--Hb_020301_050 Hb_000259_100 Hb_000259_100 Hb_022264_010--Hb_000259_100 Hb_004668_030--Hb_020301_050 Hb_004668_030--Hb_078439_010 Hb_004668_030--Hb_169511_020 Hb_020301_050--Hb_078439_010 Hb_020301_050--Hb_169511_020 Hb_078439_010--Hb_169511_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.87547 0 1.12934 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis