Hb_001008_160

Information

Type -
Description -
Location Contig1008: 147959-149064
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001008_160 0.0 - - -
2 Hb_010620_020 0.1573580204 - - receptor protein kinase, putative [Ricinus communis]
3 Hb_000333_120 0.1626799184 - - PREDICTED: thiol protease aleurain-like [Jatropha curcas]
4 Hb_002687_150 0.1692357857 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
5 Hb_000465_380 0.1712711313 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_000029_180 0.1731130034 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
7 Hb_011925_010 0.1750321152 - - PREDICTED: putative disease resistance protein RGA1 isoform X1 [Jatropha curcas]
8 Hb_108055_010 0.1781626559 - - UDP-glucosyltransferase, putative [Ricinus communis]
9 Hb_010327_010 0.1789643448 - - calcium ion binding protein, putative [Ricinus communis]
10 Hb_030370_070 0.1791729078 - - ATP binding protein, putative [Ricinus communis]
11 Hb_004712_140 0.1818099954 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
12 Hb_041290_030 0.1830959549 - - PREDICTED: uncharacterized protein LOC105640874 [Jatropha curcas]
13 Hb_000146_110 0.1855464222 - - resveratrol/hydroxycinnamic acid O-glucosyltransferase [Vitis labrusca]
14 Hb_007371_020 0.1862180593 - - PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Jatropha curcas]
15 Hb_000668_160 0.1875746695 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
16 Hb_166155_010 0.1878583413 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]
17 Hb_000307_110 0.1890638471 - - hypothetical protein JCGZ_08160 [Jatropha curcas]
18 Hb_008253_040 0.189867999 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
19 Hb_006052_040 0.1906159172 - - pyruvate decarboxylase [Hevea brasiliensis]
20 Hb_010921_060 0.1909839073 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001008_160 Hb_001008_160 Hb_010620_020 Hb_010620_020 Hb_001008_160--Hb_010620_020 Hb_000333_120 Hb_000333_120 Hb_001008_160--Hb_000333_120 Hb_002687_150 Hb_002687_150 Hb_001008_160--Hb_002687_150 Hb_000465_380 Hb_000465_380 Hb_001008_160--Hb_000465_380 Hb_000029_180 Hb_000029_180 Hb_001008_160--Hb_000029_180 Hb_011925_010 Hb_011925_010 Hb_001008_160--Hb_011925_010 Hb_129399_010 Hb_129399_010 Hb_010620_020--Hb_129399_010 Hb_000146_110 Hb_000146_110 Hb_010620_020--Hb_000146_110 Hb_000003_620 Hb_000003_620 Hb_010620_020--Hb_000003_620 Hb_009778_030 Hb_009778_030 Hb_010620_020--Hb_009778_030 Hb_001363_030 Hb_001363_030 Hb_010620_020--Hb_001363_030 Hb_000111_130 Hb_000111_130 Hb_010620_020--Hb_000111_130 Hb_108055_010 Hb_108055_010 Hb_000333_120--Hb_108055_010 Hb_000705_130 Hb_000705_130 Hb_000333_120--Hb_000705_130 Hb_015882_020 Hb_015882_020 Hb_000333_120--Hb_015882_020 Hb_000333_120--Hb_000465_380 Hb_010962_030 Hb_010962_030 Hb_000333_120--Hb_010962_030 Hb_010921_060 Hb_010921_060 Hb_000333_120--Hb_010921_060 Hb_006040_070 Hb_006040_070 Hb_002687_150--Hb_006040_070 Hb_147873_010 Hb_147873_010 Hb_002687_150--Hb_147873_010 Hb_002687_150--Hb_000333_120 Hb_008253_040 Hb_008253_040 Hb_002687_150--Hb_008253_040 Hb_000856_410 Hb_000856_410 Hb_002687_150--Hb_000856_410 Hb_000465_380--Hb_000029_180 Hb_000465_380--Hb_108055_010 Hb_000465_380--Hb_010921_060 Hb_030370_070 Hb_030370_070 Hb_000465_380--Hb_030370_070 Hb_000465_380--Hb_129399_010 Hb_002239_020 Hb_002239_020 Hb_000465_380--Hb_002239_020 Hb_000029_180--Hb_030370_070 Hb_002218_060 Hb_002218_060 Hb_000029_180--Hb_002218_060 Hb_000029_180--Hb_108055_010 Hb_010327_010 Hb_010327_010 Hb_000029_180--Hb_010327_010 Hb_000029_180--Hb_129399_010 Hb_001274_040 Hb_001274_040 Hb_011925_010--Hb_001274_040 Hb_007371_020 Hb_007371_020 Hb_011925_010--Hb_007371_020 Hb_002890_060 Hb_002890_060 Hb_011925_010--Hb_002890_060 Hb_011925_010--Hb_009778_030 Hb_000039_100 Hb_000039_100 Hb_011925_010--Hb_000039_100 Hb_000123_310 Hb_000123_310 Hb_011925_010--Hb_000123_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0473787 2.52168 0.224114 0.246602 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.150181 0.356679 0.49814

CAGE analysis