Hb_000997_110

Information

Type -
Description -
Location Contig997: 122283-124988
Sequence    

Annotation

kegg
ID cit:102618188
description uncharacterized LOC102618188
nr
ID XP_012069768.1
description PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KVY3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02280 PE=4 SV=1
Gene Ontology
ID GO:0005524
description p-loop nucleoside triphosphate hydrolase superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64857: 122172-123512
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000997_110 0.0 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
2 Hb_003371_120 0.1173751327 - - hypothetical protein JCGZ_05278 [Jatropha curcas]
3 Hb_005400_040 0.1278136139 - - PREDICTED: uncharacterized protein At4g04775-like [Jatropha curcas]
4 Hb_000010_350 0.1393340754 - - PREDICTED: programmed cell death protein 4-like [Jatropha curcas]
5 Hb_005147_040 0.1673073529 - - PREDICTED: uncharacterized protein LOC105629674 [Jatropha curcas]
6 Hb_000976_290 0.170183654 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105646228 [Jatropha curcas]
7 Hb_002918_150 0.1719749322 transcription factor TF Family: ERF ethylene-responsive element binding protein 1 [Hevea brasiliensis]
8 Hb_006026_010 0.1770364954 - - PREDICTED: cyclin-dependent kinase inhibitor 3-like [Jatropha curcas]
9 Hb_004108_170 0.1815705191 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000062_080 0.1866698197 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR11-like [Jatropha curcas]
11 Hb_089920_010 0.1867648645 - - PREDICTED: LOW QUALITY PROTEIN: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
12 Hb_048653_020 0.1905114639 - - ankyrin repeat-containing protein, putative [Ricinus communis]
13 Hb_020805_170 0.1928431678 - - PREDICTED: F-box protein CPR30-like [Jatropha curcas]
14 Hb_001863_150 0.1933632582 - - VQ motif-containing family protein [Populus trichocarpa]
15 Hb_000645_240 0.194586997 - - AMP dependent ligase, putative [Ricinus communis]
16 Hb_005656_140 0.1947765797 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 9 [Jatropha curcas]
17 Hb_003494_060 0.1952498592 - - PREDICTED: uncharacterized protein LOC105644062 isoform X1 [Jatropha curcas]
18 Hb_005157_010 0.1959591454 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
19 Hb_004976_040 0.1965363682 - - PREDICTED: protein HASTY 1 [Jatropha curcas]
20 Hb_129204_060 0.1972853587 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 20 [Jatropha curcas]

Gene co-expression network

sample Hb_000997_110 Hb_000997_110 Hb_003371_120 Hb_003371_120 Hb_000997_110--Hb_003371_120 Hb_005400_040 Hb_005400_040 Hb_000997_110--Hb_005400_040 Hb_000010_350 Hb_000010_350 Hb_000997_110--Hb_000010_350 Hb_005147_040 Hb_005147_040 Hb_000997_110--Hb_005147_040 Hb_000976_290 Hb_000976_290 Hb_000997_110--Hb_000976_290 Hb_002918_150 Hb_002918_150 Hb_000997_110--Hb_002918_150 Hb_006026_010 Hb_006026_010 Hb_003371_120--Hb_006026_010 Hb_089920_010 Hb_089920_010 Hb_003371_120--Hb_089920_010 Hb_003371_120--Hb_005400_040 Hb_000538_190 Hb_000538_190 Hb_003371_120--Hb_000538_190 Hb_020178_060 Hb_020178_060 Hb_003371_120--Hb_020178_060 Hb_001863_150 Hb_001863_150 Hb_005400_040--Hb_001863_150 Hb_005288_020 Hb_005288_020 Hb_005400_040--Hb_005288_020 Hb_005539_020 Hb_005539_020 Hb_005400_040--Hb_005539_020 Hb_005400_040--Hb_005147_040 Hb_005400_040--Hb_000976_290 Hb_000062_080 Hb_000062_080 Hb_000010_350--Hb_000062_080 Hb_001865_060 Hb_001865_060 Hb_000010_350--Hb_001865_060 Hb_000866_370 Hb_000866_370 Hb_000010_350--Hb_000866_370 Hb_004108_170 Hb_004108_170 Hb_000010_350--Hb_004108_170 Hb_000448_060 Hb_000448_060 Hb_000010_350--Hb_000448_060 Hb_089100_040 Hb_089100_040 Hb_000010_350--Hb_089100_040 Hb_020805_170 Hb_020805_170 Hb_005147_040--Hb_020805_170 Hb_005147_040--Hb_000010_350 Hb_005147_040--Hb_000062_080 Hb_005147_040--Hb_001863_150 Hb_000107_440 Hb_000107_440 Hb_005147_040--Hb_000107_440 Hb_000645_240 Hb_000645_240 Hb_005147_040--Hb_000645_240 Hb_000976_290--Hb_000062_080 Hb_127599_010 Hb_127599_010 Hb_000976_290--Hb_127599_010 Hb_003494_060 Hb_003494_060 Hb_000976_290--Hb_003494_060 Hb_000976_290--Hb_000010_350 Hb_002026_060 Hb_002026_060 Hb_000976_290--Hb_002026_060 Hb_001141_360 Hb_001141_360 Hb_000976_290--Hb_001141_360 Hb_048653_020 Hb_048653_020 Hb_002918_150--Hb_048653_020 Hb_011120_020 Hb_011120_020 Hb_002918_150--Hb_011120_020 Hb_000809_080 Hb_000809_080 Hb_002918_150--Hb_000809_080 Hb_000220_090 Hb_000220_090 Hb_002918_150--Hb_000220_090 Hb_138575_010 Hb_138575_010 Hb_002918_150--Hb_138575_010 Hb_009838_060 Hb_009838_060 Hb_002918_150--Hb_009838_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.27269 25.453 3.00595 3.84598 3.80419 1.22263
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.47812 1.37935 1.38371 9.58884 0.653851

CAGE analysis