Hb_000979_110

Information

Type -
Description -
Location Contig979: 137248-142837
Sequence    

Annotation

kegg
ID rcu:RCOM_0628780
description hypothetical protein
nr
ID XP_012072270.1
description PREDICTED: GPI mannosyltransferase 2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L0S4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04733 PE=4 SV=1
Gene Ontology
ID GO:0016740
description gpi mannosyltransferase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64295: 142186-142723
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000979_110 0.0 - - PREDICTED: GPI mannosyltransferase 2 [Jatropha curcas]
2 Hb_000732_190 0.1297828397 - - structural molecule, putative [Ricinus communis]
3 Hb_028707_070 0.1348849507 - - short-chain dehydrogenase, putative [Ricinus communis]
4 Hb_000000_230 0.135916166 transcription factor TF Family: LIM PREDICTED: protein DA1 isoform X1 [Jatropha curcas]
5 Hb_003040_040 0.1392436906 - - PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Jatropha curcas]
6 Hb_001728_020 0.1427481289 - - PREDICTED: trans-1,2-dihydrobenzene-1,2-diol dehydrogenase [Jatropha curcas]
7 Hb_000529_280 0.1536827171 - - PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Jatropha curcas]
8 Hb_000331_510 0.1595491049 - - PREDICTED: peroxisome biogenesis factor 10-like [Jatropha curcas]
9 Hb_050847_050 0.1637889605 - - PREDICTED: uncharacterized protein LOC105649140 isoform X1 [Jatropha curcas]
10 Hb_006060_020 0.1646222014 transcription factor TF Family: Tify PREDICTED: protein TIFY 8 isoform X3 [Jatropha curcas]
11 Hb_000347_450 0.1666671986 - - PREDICTED: tRNA(His) guanylyltransferase 1-like isoform X2 [Jatropha curcas]
12 Hb_000345_320 0.1670460632 transcription factor TF Family: MYB-related PREDICTED: protein ALWAYS EARLY 2-like isoform X1 [Jatropha curcas]
13 Hb_002232_430 0.167390494 - - PREDICTED: soluble inorganic pyrophosphatase 6, chloroplastic [Jatropha curcas]
14 Hb_000009_520 0.167560573 - - PREDICTED: wall-associated receptor kinase-like 14 [Jatropha curcas]
15 Hb_006637_030 0.1679539754 - - hypothetical protein CISIN_1g017413mg [Citrus sinensis]
16 Hb_008948_120 0.1704927133 - - PREDICTED: heme oxygenase 1, chloroplastic-like [Jatropha curcas]
17 Hb_000684_040 0.1706486267 - - PREDICTED: E3 ubiquitin-protein ligase MBR1 [Jatropha curcas]
18 Hb_000699_230 0.171993127 - - Ankyrin repeat family protein, putative [Theobroma cacao]
19 Hb_082741_010 0.1728348591 - - PREDICTED: uncharacterized protein LOC105649930 [Jatropha curcas]
20 Hb_012340_060 0.173150347 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000979_110 Hb_000979_110 Hb_000732_190 Hb_000732_190 Hb_000979_110--Hb_000732_190 Hb_028707_070 Hb_028707_070 Hb_000979_110--Hb_028707_070 Hb_000000_230 Hb_000000_230 Hb_000979_110--Hb_000000_230 Hb_003040_040 Hb_003040_040 Hb_000979_110--Hb_003040_040 Hb_001728_020 Hb_001728_020 Hb_000979_110--Hb_001728_020 Hb_000529_280 Hb_000529_280 Hb_000979_110--Hb_000529_280 Hb_001140_360 Hb_001140_360 Hb_000732_190--Hb_001140_360 Hb_000732_190--Hb_001728_020 Hb_000331_510 Hb_000331_510 Hb_000732_190--Hb_000331_510 Hb_000926_260 Hb_000926_260 Hb_000732_190--Hb_000926_260 Hb_000012_240 Hb_000012_240 Hb_000732_190--Hb_000012_240 Hb_001153_180 Hb_001153_180 Hb_028707_070--Hb_001153_180 Hb_006816_480 Hb_006816_480 Hb_028707_070--Hb_006816_480 Hb_004453_080 Hb_004453_080 Hb_028707_070--Hb_004453_080 Hb_012725_120 Hb_012725_120 Hb_028707_070--Hb_012725_120 Hb_000699_230 Hb_000699_230 Hb_028707_070--Hb_000699_230 Hb_050847_050 Hb_050847_050 Hb_000000_230--Hb_050847_050 Hb_006588_060 Hb_006588_060 Hb_000000_230--Hb_006588_060 Hb_000521_240 Hb_000521_240 Hb_000000_230--Hb_000521_240 Hb_000699_150 Hb_000699_150 Hb_000000_230--Hb_000699_150 Hb_000490_060 Hb_000490_060 Hb_000000_230--Hb_000490_060 Hb_000086_420 Hb_000086_420 Hb_000000_230--Hb_000086_420 Hb_001277_030 Hb_001277_030 Hb_003040_040--Hb_001277_030 Hb_001571_060 Hb_001571_060 Hb_003040_040--Hb_001571_060 Hb_002486_080 Hb_002486_080 Hb_003040_040--Hb_002486_080 Hb_001277_050 Hb_001277_050 Hb_003040_040--Hb_001277_050 Hb_005656_170 Hb_005656_170 Hb_003040_040--Hb_005656_170 Hb_005946_150 Hb_005946_150 Hb_003040_040--Hb_005946_150 Hb_001728_020--Hb_000529_280 Hb_006060_020 Hb_006060_020 Hb_001728_020--Hb_006060_020 Hb_026198_010 Hb_026198_010 Hb_001728_020--Hb_026198_010 Hb_172632_050 Hb_172632_050 Hb_001728_020--Hb_172632_050 Hb_002686_150 Hb_002686_150 Hb_001728_020--Hb_002686_150 Hb_000723_230 Hb_000723_230 Hb_000529_280--Hb_000723_230 Hb_000645_200 Hb_000645_200 Hb_000529_280--Hb_000645_200 Hb_000139_470 Hb_000139_470 Hb_000529_280--Hb_000139_470 Hb_000529_280--Hb_172632_050 Hb_093458_010 Hb_093458_010 Hb_000529_280--Hb_093458_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.293589 2.16236 2.05681 1.11765 0.0701489 0.555994
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.28067 1.85229 0.724854 2.51312 1.14232

CAGE analysis