Hb_000951_150

Information

Type -
Description -
Location Contig951: 231458-232004
Sequence    

Annotation

kegg
ID pop:POPTR_0015s05850g
description hypothetical protein
nr
ID XP_006374303.1
description hypothetical protein POPTR_0015s05850g [Populus trichocarpa]
swissprot
ID -
description -
trembl
ID A0A022RXY4
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a019878mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000951_150 0.0 - - hypothetical protein POPTR_0015s05850g [Populus trichocarpa]
2 Hb_000922_200 0.0704809146 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0012s08280g [Populus trichocarpa]
3 Hb_019654_180 0.1111474091 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
4 Hb_051663_010 0.1126047422 - - receptor-kinase, putative [Ricinus communis]
5 Hb_000816_240 0.1132141188 - - PREDICTED: phosphoglucan phosphatase LSF2, chloroplastic [Jatropha curcas]
6 Hb_000904_120 0.1157850777 - - conserved hypothetical protein [Ricinus communis]
7 Hb_149694_010 0.118496361 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
8 Hb_001541_130 0.1203171563 - - GDSL esterase/lipase [Morus notabilis]
9 Hb_002374_180 0.1203336948 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Jatropha curcas]
10 Hb_006831_090 0.1208087784 - - PREDICTED: uncharacterized protein LOC105642125 isoform X1 [Jatropha curcas]
11 Hb_007617_010 0.1214455916 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH63 isoform X1 [Jatropha curcas]
12 Hb_002150_090 0.1214903421 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
13 Hb_125573_010 0.1217103999 - - ATP-binding cassette transporter, putative [Ricinus communis]
14 Hb_004032_280 0.1225482909 - - PREDICTED: uncharacterized protein LOC105635149 [Jatropha curcas]
15 Hb_000617_360 0.1231689134 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001095_020 0.1238013424 - - PREDICTED: F-box protein At2g26850-like [Jatropha curcas]
17 Hb_000031_180 0.1250074809 - - sarcosine oxidase, putative [Ricinus communis]
18 Hb_002572_040 0.1259438514 - - PREDICTED: uncharacterized protein LOC105635149 [Jatropha curcas]
19 Hb_006075_030 0.12605907 - - PREDICTED: uncharacterized protein LOC105641890 isoform X1 [Jatropha curcas]
20 Hb_010810_060 0.1262539279 - - sterol desaturase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000951_150 Hb_000951_150 Hb_000922_200 Hb_000922_200 Hb_000951_150--Hb_000922_200 Hb_019654_180 Hb_019654_180 Hb_000951_150--Hb_019654_180 Hb_051663_010 Hb_051663_010 Hb_000951_150--Hb_051663_010 Hb_000816_240 Hb_000816_240 Hb_000951_150--Hb_000816_240 Hb_000904_120 Hb_000904_120 Hb_000951_150--Hb_000904_120 Hb_149694_010 Hb_149694_010 Hb_000951_150--Hb_149694_010 Hb_000922_200--Hb_051663_010 Hb_000000_390 Hb_000000_390 Hb_000922_200--Hb_000000_390 Hb_004635_120 Hb_004635_120 Hb_000922_200--Hb_004635_120 Hb_001638_200 Hb_001638_200 Hb_000922_200--Hb_001638_200 Hb_012395_240 Hb_012395_240 Hb_000922_200--Hb_012395_240 Hb_001729_030 Hb_001729_030 Hb_019654_180--Hb_001729_030 Hb_000190_230 Hb_000190_230 Hb_019654_180--Hb_000190_230 Hb_009838_070 Hb_009838_070 Hb_019654_180--Hb_009838_070 Hb_004032_280 Hb_004032_280 Hb_019654_180--Hb_004032_280 Hb_006831_090 Hb_006831_090 Hb_019654_180--Hb_006831_090 Hb_001516_010 Hb_001516_010 Hb_051663_010--Hb_001516_010 Hb_051663_010--Hb_000000_390 Hb_111985_100 Hb_111985_100 Hb_051663_010--Hb_111985_100 Hb_032920_020 Hb_032920_020 Hb_051663_010--Hb_032920_020 Hb_009486_050 Hb_009486_050 Hb_051663_010--Hb_009486_050 Hb_137222_010 Hb_137222_010 Hb_000816_240--Hb_137222_010 Hb_005725_240 Hb_005725_240 Hb_000816_240--Hb_005725_240 Hb_004096_210 Hb_004096_210 Hb_000816_240--Hb_004096_210 Hb_000976_400 Hb_000976_400 Hb_000816_240--Hb_000976_400 Hb_069696_020 Hb_069696_020 Hb_000816_240--Hb_069696_020 Hb_006075_030 Hb_006075_030 Hb_000816_240--Hb_006075_030 Hb_000031_180 Hb_000031_180 Hb_000904_120--Hb_000031_180 Hb_012098_160 Hb_012098_160 Hb_000904_120--Hb_012098_160 Hb_007163_100 Hb_007163_100 Hb_000904_120--Hb_007163_100 Hb_015561_010 Hb_015561_010 Hb_000904_120--Hb_015561_010 Hb_000329_780 Hb_000329_780 Hb_000904_120--Hb_000329_780 Hb_002119_100 Hb_002119_100 Hb_000904_120--Hb_002119_100 Hb_002740_050 Hb_002740_050 Hb_149694_010--Hb_002740_050 Hb_003855_060 Hb_003855_060 Hb_149694_010--Hb_003855_060 Hb_143629_170 Hb_143629_170 Hb_149694_010--Hb_143629_170 Hb_007904_150 Hb_007904_150 Hb_149694_010--Hb_007904_150 Hb_004943_020 Hb_004943_020 Hb_149694_010--Hb_004943_020 Hb_052530_020 Hb_052530_020 Hb_149694_010--Hb_052530_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.139291 0.313309 6.88451 8.0398 0.132114 0.130896
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.261273 0 0.480357 7.87592

CAGE analysis