Hb_000948_090

Information

Type -
Description -
Location Contig948: 117418-118940
Sequence    

Annotation

kegg
ID rcu:RCOM_0517310
description carbonic anhydrase, putative (EC:4.2.1.1)
nr
ID XP_002528758.1
description carbonic anhydrase, putative [Ricinus communis]
swissprot
ID O04846
description Alpha carbonic anhydrase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=2
trembl
ID B9SRY9
description Carbonic anhydrase, putative OS=Ricinus communis GN=RCOM_0517310 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000948_090 0.0 - - carbonic anhydrase, putative [Ricinus communis]
2 Hb_089419_010 0.1922724907 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
3 Hb_001106_050 0.3392587345 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
4 Hb_001952_040 0.3494898449 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
5 Hb_000165_150 0.3512620663 - - PREDICTED: pistil-specific extensin-like protein [Jatropha curcas]
6 Hb_139576_010 0.3625068408 - - PREDICTED: uncharacterized protein LOC105795953 [Gossypium raimondii]
7 Hb_000154_010 0.3680432246 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_000172_130 0.3767514568 - - hypothetical protein JCGZ_24076 [Jatropha curcas]
9 Hb_001523_030 0.3877938526 - - protein binding protein, putative [Ricinus communis]
10 Hb_003002_030 0.3904261574 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
11 Hb_000101_150 0.399095464 - - -
12 Hb_012034_010 0.3993008182 - - -
13 Hb_009467_050 0.399504921 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]
14 Hb_001282_030 0.4066403625 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
15 Hb_172154_010 0.4085424324 - - hypothetical protein JCGZ_25247 [Jatropha curcas]
16 Hb_000939_010 0.4100212796 - - PREDICTED: transcription factor bHLH113-like [Jatropha curcas]
17 Hb_087203_010 0.4106090108 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 68-like [Pyrus x bretschneideri]
18 Hb_003209_160 0.4108402498 - - PREDICTED: putative SNAP25 homologous protein SNAP30 [Populus euphratica]
19 Hb_000772_040 0.4110205223 - - PREDICTED: uncharacterized protein LOC105036273 [Elaeis guineensis]
20 Hb_006113_010 0.4178476359 - - hypothetical protein VITISV_015014 [Vitis vinifera]

Gene co-expression network

sample Hb_000948_090 Hb_000948_090 Hb_089419_010 Hb_089419_010 Hb_000948_090--Hb_089419_010 Hb_001106_050 Hb_001106_050 Hb_000948_090--Hb_001106_050 Hb_001952_040 Hb_001952_040 Hb_000948_090--Hb_001952_040 Hb_000165_150 Hb_000165_150 Hb_000948_090--Hb_000165_150 Hb_139576_010 Hb_139576_010 Hb_000948_090--Hb_139576_010 Hb_000154_010 Hb_000154_010 Hb_000948_090--Hb_000154_010 Hb_089419_010--Hb_000165_150 Hb_089419_010--Hb_001952_040 Hb_089419_010--Hb_139576_010 Hb_003002_030 Hb_003002_030 Hb_089419_010--Hb_003002_030 Hb_166124_010 Hb_166124_010 Hb_089419_010--Hb_166124_010 Hb_003881_050 Hb_003881_050 Hb_001106_050--Hb_003881_050 Hb_052689_010 Hb_052689_010 Hb_001106_050--Hb_052689_010 Hb_055101_010 Hb_055101_010 Hb_001106_050--Hb_055101_010 Hb_000251_090 Hb_000251_090 Hb_001106_050--Hb_000251_090 Hb_003688_160 Hb_003688_160 Hb_001106_050--Hb_003688_160 Hb_001242_090 Hb_001242_090 Hb_001106_050--Hb_001242_090 Hb_079067_010 Hb_079067_010 Hb_001952_040--Hb_079067_010 Hb_086077_020 Hb_086077_020 Hb_001952_040--Hb_086077_020 Hb_004440_080 Hb_004440_080 Hb_001952_040--Hb_004440_080 Hb_000012_460 Hb_000012_460 Hb_001952_040--Hb_000012_460 Hb_003711_030 Hb_003711_030 Hb_000165_150--Hb_003711_030 Hb_062482_010 Hb_062482_010 Hb_000165_150--Hb_062482_010 Hb_000172_130 Hb_000172_130 Hb_000165_150--Hb_000172_130 Hb_011478_010 Hb_011478_010 Hb_000165_150--Hb_011478_010 Hb_167183_010 Hb_167183_010 Hb_000165_150--Hb_167183_010 Hb_139576_010--Hb_166124_010 Hb_012034_010 Hb_012034_010 Hb_139576_010--Hb_012034_010 Hb_006113_010 Hb_006113_010 Hb_139576_010--Hb_006113_010 Hb_003523_040 Hb_003523_040 Hb_139576_010--Hb_003523_040 Hb_000987_110 Hb_000987_110 Hb_139576_010--Hb_000987_110 Hb_004650_060 Hb_004650_060 Hb_000154_010--Hb_004650_060 Hb_133820_010 Hb_133820_010 Hb_000154_010--Hb_133820_010 Hb_006132_030 Hb_006132_030 Hb_000154_010--Hb_006132_030 Hb_043708_010 Hb_043708_010 Hb_000154_010--Hb_043708_010 Hb_000160_320 Hb_000160_320 Hb_000154_010--Hb_000160_320 Hb_036988_010 Hb_036988_010 Hb_000154_010--Hb_036988_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.141393 0.040091 0 0 0 0.0742172
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.14946 0 0.165257

CAGE analysis