Hb_000313_290

Information

Type -
Description -
Location Contig313: 417286-426938
Sequence    

Annotation

kegg
ID vvi:100264613
description ABC transporter G family member 7
nr
ID AIU41647.1
description ABC transporter family protein [Hevea brasiliensis]
swissprot
ID Q9ZU35
description ABC transporter G family member 7 OS=Arabidopsis thaliana GN=ABCG7 PE=2 SV=1
trembl
ID A0A097P9S5
description ABC transporter family protein OS=Hevea brasiliensis GN=ABCG7 PE=2 SV=1
Gene Ontology
ID GO:0016020
description abc transporter family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33154: 417288-426938 , PASA_asmbl_33155: 417289-426895
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000313_290 0.0 - - ABC transporter family protein [Hevea brasiliensis]
2 Hb_000418_090 0.083108861 - - ABC transporter family protein [Hevea brasiliensis]
3 Hb_001624_040 0.1220553279 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 5 isoform X1 [Jatropha curcas]
4 Hb_000331_340 0.1243305275 - - PREDICTED: uncharacterized protein LOC105640234 [Jatropha curcas]
5 Hb_003683_030 0.132558315 - - PREDICTED: uridine-cytidine kinase C isoform X1 [Jatropha curcas]
6 Hb_001250_040 0.1339198942 - - hypothetical protein CISIN_1g018444mg [Citrus sinensis]
7 Hb_000010_130 0.1348523114 - - PREDICTED: rhodanese-like domain-containing protein 11, chloroplastic [Pyrus x bretschneideri]
8 Hb_000264_180 0.1398430443 - - PREDICTED: uncharacterized protein LOC100777318 [Glycine max]
9 Hb_000424_070 0.1438374545 - - PREDICTED: serine/arginine repetitive matrix protein 2-like [Jatropha curcas]
10 Hb_002447_050 0.1451627114 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
11 Hb_000453_230 0.1459512439 - - PREDICTED: NO-associated protein 1, chloroplastic/mitochondrial [Jatropha curcas]
12 Hb_000749_200 0.1475731531 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X1 [Jatropha curcas]
13 Hb_002249_040 0.1511402463 transcription factor TF Family: bHLH PREDICTED: transcription factor ICE1-like [Jatropha curcas]
14 Hb_027380_210 0.1566266926 - - PREDICTED: uncharacterized protein LOC105634030 [Jatropha curcas]
15 Hb_000302_190 0.1588310285 - - PREDICTED: uncharacterized protein At3g49140-like [Jatropha curcas]
16 Hb_000211_040 0.1612535755 - - PREDICTED: uncharacterized protein LOC105629236 [Jatropha curcas]
17 Hb_002301_210 0.161807826 - - PREDICTED: receptor-like protein kinase At5g59670 isoform X2 [Jatropha curcas]
18 Hb_029622_030 0.1628825422 - - ankyrin repeat-containing protein, putative [Ricinus communis]
19 Hb_006618_070 0.1631930945 - - PREDICTED: uncharacterized protein LOC105645975 isoform X1 [Jatropha curcas]
20 Hb_000836_350 0.1650187715 - - PREDICTED: uncharacterized protein LOC105642938 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000313_290 Hb_000313_290 Hb_000418_090 Hb_000418_090 Hb_000313_290--Hb_000418_090 Hb_001624_040 Hb_001624_040 Hb_000313_290--Hb_001624_040 Hb_000331_340 Hb_000331_340 Hb_000313_290--Hb_000331_340 Hb_003683_030 Hb_003683_030 Hb_000313_290--Hb_003683_030 Hb_001250_040 Hb_001250_040 Hb_000313_290--Hb_001250_040 Hb_000010_130 Hb_000010_130 Hb_000313_290--Hb_000010_130 Hb_000418_090--Hb_001624_040 Hb_000418_090--Hb_000331_340 Hb_000453_230 Hb_000453_230 Hb_000418_090--Hb_000453_230 Hb_000418_090--Hb_000010_130 Hb_000418_090--Hb_001250_040 Hb_011609_010 Hb_011609_010 Hb_001624_040--Hb_011609_010 Hb_002301_210 Hb_002301_210 Hb_001624_040--Hb_002301_210 Hb_001624_040--Hb_000453_230 Hb_004116_160 Hb_004116_160 Hb_001624_040--Hb_004116_160 Hb_000803_090 Hb_000803_090 Hb_001624_040--Hb_000803_090 Hb_002447_050 Hb_002447_050 Hb_000331_340--Hb_002447_050 Hb_000331_340--Hb_003683_030 Hb_000302_190 Hb_000302_190 Hb_000331_340--Hb_000302_190 Hb_003529_140 Hb_003529_140 Hb_000331_340--Hb_003529_140 Hb_004871_010 Hb_004871_010 Hb_000331_340--Hb_004871_010 Hb_000749_200 Hb_000749_200 Hb_003683_030--Hb_000749_200 Hb_001689_050 Hb_001689_050 Hb_003683_030--Hb_001689_050 Hb_003894_060 Hb_003894_060 Hb_003683_030--Hb_003894_060 Hb_004837_210 Hb_004837_210 Hb_003683_030--Hb_004837_210 Hb_003683_030--Hb_001250_040 Hb_001953_100 Hb_001953_100 Hb_003683_030--Hb_001953_100 Hb_001250_040--Hb_001689_050 Hb_000136_020 Hb_000136_020 Hb_001250_040--Hb_000136_020 Hb_001571_030 Hb_001571_030 Hb_001250_040--Hb_001571_030 Hb_007594_080 Hb_007594_080 Hb_001250_040--Hb_007594_080 Hb_001250_040--Hb_001624_040 Hb_015292_040 Hb_015292_040 Hb_000010_130--Hb_015292_040 Hb_000424_070 Hb_000424_070 Hb_000010_130--Hb_000424_070 Hb_030131_020 Hb_030131_020 Hb_000010_130--Hb_030131_020 Hb_006618_070 Hb_006618_070 Hb_000010_130--Hb_006618_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.80687 11.4871 28.9971 5.79385 11.1319 4.12524
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.05967 1.45244 0.849087 3.92672 17.0152

CAGE analysis