Hb_000261_190

Information

Type -
Description -
Location Contig261: 145530-148091
Sequence    

Annotation

kegg
ID rcu:RCOM_1018590
description hypothetical protein
nr
ID XP_012071268.1
description PREDICTED: uncharacterized protein At4g04980-like [Jatropha curcas]
swissprot
ID Q1PEB4
description Uncharacterized protein At4g04980 OS=Arabidopsis thaliana GN=At4g04980 PE=2 SV=1
trembl
ID A0A067L4C4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01107 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000261_190 0.0 - - PREDICTED: uncharacterized protein At4g04980-like [Jatropha curcas]
2 Hb_002739_150 0.1433490056 - - Uncharacterized protein TCM_016791 [Theobroma cacao]
3 Hb_000836_120 0.1529792935 - - syntaxin, putative [Ricinus communis]
4 Hb_002273_050 0.1538143584 - - PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like [Jatropha curcas]
5 Hb_005656_140 0.1592200994 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 9 [Jatropha curcas]
6 Hb_013394_080 0.1639365781 - - PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X2 [Jatropha curcas]
7 Hb_000123_330 0.1714408829 - - hypothetical protein M569_14136, partial [Genlisea aurea]
8 Hb_001225_090 0.1734386941 transcription factor TF Family: RWP-RK transcription factor, putative [Ricinus communis]
9 Hb_001269_690 0.1755946059 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001638_040 0.1758784175 - - Nucleobase-ascorbate transporter 3 [Glycine soja]
11 Hb_000853_030 0.1774686353 - - sucrose synthase 2 [Hevea brasiliensis]
12 Hb_000120_970 0.1806176695 - - PREDICTED: probable acyl-activating enzyme 2 isoform X2 [Jatropha curcas]
13 Hb_002273_080 0.1843538195 - - geranylgeranyl reductase [Monoraphidium neglectum]
14 Hb_004108_170 0.1856579307 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003107_020 0.1876014012 - - hypothetical protein JCGZ_18656 [Jatropha curcas]
16 Hb_002876_290 0.1897256376 - - PREDICTED: uncharacterized protein LOC104446353 [Eucalyptus grandis]
17 Hb_164010_070 0.1902030675 - - Paramyosin, putative [Ricinus communis]
18 Hb_002609_090 0.1912481528 - - PREDICTED: phosphomethylpyrimidine synthase, chloroplastic isoform X2 [Jatropha curcas]
19 Hb_003211_010 0.1922171808 - - PREDICTED: uncharacterized protein LOC105635705 [Jatropha curcas]
20 Hb_006663_030 0.1924897045 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000261_190 Hb_000261_190 Hb_002739_150 Hb_002739_150 Hb_000261_190--Hb_002739_150 Hb_000836_120 Hb_000836_120 Hb_000261_190--Hb_000836_120 Hb_002273_050 Hb_002273_050 Hb_000261_190--Hb_002273_050 Hb_005656_140 Hb_005656_140 Hb_000261_190--Hb_005656_140 Hb_013394_080 Hb_013394_080 Hb_000261_190--Hb_013394_080 Hb_000123_330 Hb_000123_330 Hb_000261_190--Hb_000123_330 Hb_001055_030 Hb_001055_030 Hb_002739_150--Hb_001055_030 Hb_001638_040 Hb_001638_040 Hb_002739_150--Hb_001638_040 Hb_156850_070 Hb_156850_070 Hb_002739_150--Hb_156850_070 Hb_006663_030 Hb_006663_030 Hb_002739_150--Hb_006663_030 Hb_080451_010 Hb_080451_010 Hb_002739_150--Hb_080451_010 Hb_010831_020 Hb_010831_020 Hb_002739_150--Hb_010831_020 Hb_000836_120--Hb_002273_050 Hb_002235_240 Hb_002235_240 Hb_000836_120--Hb_002235_240 Hb_129204_060 Hb_129204_060 Hb_000836_120--Hb_129204_060 Hb_003849_260 Hb_003849_260 Hb_000836_120--Hb_003849_260 Hb_000215_410 Hb_000215_410 Hb_000836_120--Hb_000215_410 Hb_000836_120--Hb_001638_040 Hb_002273_080 Hb_002273_080 Hb_002273_050--Hb_002273_080 Hb_002273_050--Hb_000215_410 Hb_001269_690 Hb_001269_690 Hb_002273_050--Hb_001269_690 Hb_002686_280 Hb_002686_280 Hb_002273_050--Hb_002686_280 Hb_002273_050--Hb_129204_060 Hb_003494_060 Hb_003494_060 Hb_005656_140--Hb_003494_060 Hb_002760_040 Hb_002760_040 Hb_005656_140--Hb_002760_040 Hb_009838_060 Hb_009838_060 Hb_005656_140--Hb_009838_060 Hb_005656_140--Hb_129204_060 Hb_001141_360 Hb_001141_360 Hb_005656_140--Hb_001141_360 Hb_005656_140--Hb_002235_240 Hb_001894_120 Hb_001894_120 Hb_013394_080--Hb_001894_120 Hb_003906_160 Hb_003906_160 Hb_013394_080--Hb_003906_160 Hb_002701_040 Hb_002701_040 Hb_013394_080--Hb_002701_040 Hb_011311_020 Hb_011311_020 Hb_013394_080--Hb_011311_020 Hb_002276_130 Hb_002276_130 Hb_013394_080--Hb_002276_130 Hb_013394_080--Hb_156850_070 Hb_006683_040 Hb_006683_040 Hb_000123_330--Hb_006683_040 Hb_144744_010 Hb_144744_010 Hb_000123_330--Hb_144744_010 Hb_007894_130 Hb_007894_130 Hb_000123_330--Hb_007894_130 Hb_000123_330--Hb_001055_030 Hb_127599_010 Hb_127599_010 Hb_000123_330--Hb_127599_010 Hb_005203_020 Hb_005203_020 Hb_000123_330--Hb_005203_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.674707 4.00461 0.0147757 1.12158 1.22599 1.22454
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.622706 0.777197 0.609467 1.49834 0.178763

CAGE analysis