Hb_002276_130

Information

Type -
Description -
Location Contig2276: 135699-137645
Sequence    

Annotation

kegg
ID rcu:RCOM_1466660
description inositol or phosphatidylinositol kinase, putative
nr
ID XP_002514582.1
description inositol or phosphatidylinositol kinase, putative [Ricinus communis]
swissprot
ID Q9SI52
description Phosphatidylinositol 4-kinase gamma 7 OS=Arabidopsis thaliana GN=PI4KG7 PE=1 SV=2
trembl
ID B9RLG3
description Inositol or phosphatidylinositol kinase, putative OS=Ricinus communis GN=RCOM_1466660 PE=4 SV=1
Gene Ontology
ID GO:0016773
description phosphatidylinositol 4-kinase gamma 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23741: 135413-139005
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002276_130 0.0 - - inositol or phosphatidylinositol kinase, putative [Ricinus communis]
2 Hb_000866_170 0.0827354988 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
3 Hb_000245_040 0.0883284036 - - PREDICTED: uncharacterized protein LOC105631550 isoform X2 [Jatropha curcas]
4 Hb_006938_080 0.0919659759 - - PREDICTED: U-box domain-containing protein 4 [Jatropha curcas]
5 Hb_000107_420 0.0954184539 - - PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Jatropha curcas]
6 Hb_010874_020 0.0955323138 - - PREDICTED: uncharacterized protein LOC105636745 [Jatropha curcas]
7 Hb_000206_240 0.096840521 - - conserved hypothetical protein [Ricinus communis]
8 Hb_168697_010 0.0999302095 - - hypothetical protein JCGZ_16772 [Jatropha curcas]
9 Hb_000213_100 0.1002938768 - - PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like [Jatropha curcas]
10 Hb_007441_220 0.101197351 - - PREDICTED: eukaryotic translation initiation factor 4G [Jatropha curcas]
11 Hb_004545_140 0.1025413939 - - hypothetical protein JCGZ_23405 [Jatropha curcas]
12 Hb_002942_100 0.1039010419 - - PREDICTED: pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Jatropha curcas]
13 Hb_022250_090 0.1042362771 - - PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Jatropha curcas]
14 Hb_004032_380 0.1045546816 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Jatropha curcas]
15 Hb_000028_280 0.1076570286 transcription factor TF Family: NF-X1 PREDICTED: NF-X1-type zinc finger protein NFXL1 [Jatropha curcas]
16 Hb_089032_040 0.1076775171 - - PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Jatropha curcas]
17 Hb_000395_190 0.1080125908 - - PREDICTED: F-box/LRR-repeat protein 7-like [Jatropha curcas]
18 Hb_000270_670 0.1084772261 transcription factor TF Family: IWS1 PREDICTED: uncharacterized protein LOC105640420 [Jatropha curcas]
19 Hb_001956_200 0.1089418783 - - pumilio/Puf RNA-binding domain-containing family protein [Populus trichocarpa]
20 Hb_004117_310 0.1093500547 - - PREDICTED: uncharacterized protein LOC105648043 [Jatropha curcas]

Gene co-expression network

sample Hb_002276_130 Hb_002276_130 Hb_000866_170 Hb_000866_170 Hb_002276_130--Hb_000866_170 Hb_000245_040 Hb_000245_040 Hb_002276_130--Hb_000245_040 Hb_006938_080 Hb_006938_080 Hb_002276_130--Hb_006938_080 Hb_000107_420 Hb_000107_420 Hb_002276_130--Hb_000107_420 Hb_010874_020 Hb_010874_020 Hb_002276_130--Hb_010874_020 Hb_000206_240 Hb_000206_240 Hb_002276_130--Hb_000206_240 Hb_000866_170--Hb_000245_040 Hb_000297_010 Hb_000297_010 Hb_000866_170--Hb_000297_010 Hb_000395_190 Hb_000395_190 Hb_000866_170--Hb_000395_190 Hb_000890_210 Hb_000890_210 Hb_000866_170--Hb_000890_210 Hb_004724_150 Hb_004724_150 Hb_000866_170--Hb_004724_150 Hb_001341_170 Hb_001341_170 Hb_000866_170--Hb_001341_170 Hb_000107_490 Hb_000107_490 Hb_000245_040--Hb_000107_490 Hb_000245_040--Hb_000297_010 Hb_000245_040--Hb_004724_150 Hb_000245_040--Hb_006938_080 Hb_000245_040--Hb_000890_210 Hb_002809_050 Hb_002809_050 Hb_006938_080--Hb_002809_050 Hb_000646_050 Hb_000646_050 Hb_006938_080--Hb_000646_050 Hb_006938_080--Hb_000866_170 Hb_006938_080--Hb_000107_490 Hb_006938_080--Hb_000395_190 Hb_000107_420--Hb_000206_240 Hb_001085_060 Hb_001085_060 Hb_000107_420--Hb_001085_060 Hb_007441_220 Hb_007441_220 Hb_000107_420--Hb_007441_220 Hb_004374_070 Hb_004374_070 Hb_000107_420--Hb_004374_070 Hb_000204_210 Hb_000204_210 Hb_000107_420--Hb_000204_210 Hb_168697_010 Hb_168697_010 Hb_010874_020--Hb_168697_010 Hb_010874_020--Hb_006938_080 Hb_000000_370 Hb_000000_370 Hb_010874_020--Hb_000000_370 Hb_012490_080 Hb_012490_080 Hb_010874_020--Hb_012490_080 Hb_001617_050 Hb_001617_050 Hb_010874_020--Hb_001617_050 Hb_004052_090 Hb_004052_090 Hb_000206_240--Hb_004052_090 Hb_004846_070 Hb_004846_070 Hb_000206_240--Hb_004846_070 Hb_000213_100 Hb_000213_100 Hb_000206_240--Hb_000213_100 Hb_000258_270 Hb_000258_270 Hb_000206_240--Hb_000258_270 Hb_007483_100 Hb_007483_100 Hb_000206_240--Hb_007483_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
52.4115 99.5456 12.389 57.0512 70.5457 70.4597
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
61.943 56.4403 135.724 77.0566 46.9778

CAGE analysis