Hb_168697_010

Information

Type -
Description -
Location Contig168697: 407-1903
Sequence    

Annotation

kegg
ID rcu:RCOM_0968100
description hypothetical protein
nr
ID KDP43485.1
description hypothetical protein JCGZ_16772 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LG09
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16772 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_168697_010 0.0 - - hypothetical protein JCGZ_16772 [Jatropha curcas]
2 Hb_000140_230 0.0790427899 - - PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Jatropha curcas]
3 Hb_000680_050 0.081682874 - - hypothetical protein JCGZ_24767 [Jatropha curcas]
4 Hb_010874_020 0.0867710331 - - PREDICTED: uncharacterized protein LOC105636745 [Jatropha curcas]
5 Hb_048219_010 0.0908423289 - - coronatine-insensitive 1 [Hevea brasiliensis]
6 Hb_003020_050 0.0942421993 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
7 Hb_009486_200 0.0958383804 - - PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like [Jatropha curcas]
8 Hb_001141_390 0.097440966 - - PREDICTED: uncharacterized protein LOC105631983 [Jatropha curcas]
9 Hb_000866_120 0.0997779548 - - PREDICTED: mediator of RNA polymerase II transcription subunit 12 [Jatropha curcas]
10 Hb_002276_130 0.0999302095 - - inositol or phosphatidylinositol kinase, putative [Ricinus communis]
11 Hb_000264_320 0.1025352748 - - PREDICTED: pentatricopeptide repeat-containing protein At2g33760 [Jatropha curcas]
12 Hb_000204_210 0.1039038516 - - PREDICTED: uncharacterized protein LOC105639237 [Jatropha curcas]
13 Hb_002316_150 0.107059871 transcription factor TF Family: IWS1 PREDICTED: uncharacterized protein LOC105640420 [Jatropha curcas]
14 Hb_008775_040 0.1073151694 - - Pentatricopeptide repeat (PPR) superfamily protein, putative [Theobroma cacao]
15 Hb_001584_150 0.1082874022 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Jatropha curcas]
16 Hb_000213_100 0.1095749967 - - PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like [Jatropha curcas]
17 Hb_000107_420 0.1096907141 - - PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Jatropha curcas]
18 Hb_000011_330 0.1131016271 - - fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis]
19 Hb_000270_670 0.1136547508 transcription factor TF Family: IWS1 PREDICTED: uncharacterized protein LOC105640420 [Jatropha curcas]
20 Hb_022250_090 0.1136822748 - - PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Jatropha curcas]

Gene co-expression network

sample Hb_168697_010 Hb_168697_010 Hb_000140_230 Hb_000140_230 Hb_168697_010--Hb_000140_230 Hb_000680_050 Hb_000680_050 Hb_168697_010--Hb_000680_050 Hb_010874_020 Hb_010874_020 Hb_168697_010--Hb_010874_020 Hb_048219_010 Hb_048219_010 Hb_168697_010--Hb_048219_010 Hb_003020_050 Hb_003020_050 Hb_168697_010--Hb_003020_050 Hb_009486_200 Hb_009486_200 Hb_168697_010--Hb_009486_200 Hb_000264_320 Hb_000264_320 Hb_000140_230--Hb_000264_320 Hb_000140_230--Hb_003020_050 Hb_002316_150 Hb_002316_150 Hb_000140_230--Hb_002316_150 Hb_008775_040 Hb_008775_040 Hb_000140_230--Hb_008775_040 Hb_000140_230--Hb_048219_010 Hb_001141_390 Hb_001141_390 Hb_000680_050--Hb_001141_390 Hb_000680_050--Hb_048219_010 Hb_012395_220 Hb_012395_220 Hb_000680_050--Hb_012395_220 Hb_002813_050 Hb_002813_050 Hb_000680_050--Hb_002813_050 Hb_005015_070 Hb_005015_070 Hb_000680_050--Hb_005015_070 Hb_006938_080 Hb_006938_080 Hb_010874_020--Hb_006938_080 Hb_002276_130 Hb_002276_130 Hb_010874_020--Hb_002276_130 Hb_000000_370 Hb_000000_370 Hb_010874_020--Hb_000000_370 Hb_012490_080 Hb_012490_080 Hb_010874_020--Hb_012490_080 Hb_001617_050 Hb_001617_050 Hb_010874_020--Hb_001617_050 Hb_012564_030 Hb_012564_030 Hb_048219_010--Hb_012564_030 Hb_004767_050 Hb_004767_050 Hb_048219_010--Hb_004767_050 Hb_001818_070 Hb_001818_070 Hb_048219_010--Hb_001818_070 Hb_001856_230 Hb_001856_230 Hb_048219_010--Hb_001856_230 Hb_003544_110 Hb_003544_110 Hb_048219_010--Hb_003544_110 Hb_011491_010 Hb_011491_010 Hb_048219_010--Hb_011491_010 Hb_003020_050--Hb_000264_320 Hb_003020_050--Hb_008775_040 Hb_073562_010 Hb_073562_010 Hb_003020_050--Hb_073562_010 Hb_001956_200 Hb_001956_200 Hb_003020_050--Hb_001956_200 Hb_002311_040 Hb_002311_040 Hb_009486_200--Hb_002311_040 Hb_008500_010 Hb_008500_010 Hb_009486_200--Hb_008500_010 Hb_004143_130 Hb_004143_130 Hb_009486_200--Hb_004143_130 Hb_012656_030 Hb_012656_030 Hb_009486_200--Hb_012656_030 Hb_002678_020 Hb_002678_020 Hb_009486_200--Hb_002678_020 Hb_000204_210 Hb_000204_210 Hb_009486_200--Hb_000204_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.56698 3.18793 0.650947 1.07639 1.28577 2.0729
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.08935 1.16229 3.72287 1.74018 1.09259

CAGE analysis