Hb_004767_050

Information

Type -
Description -
Location Contig4767: 37017-38033
Sequence    

Annotation

kegg
ID rcu:RCOM_0476310
description transferase, transferring glycosyl groups, putative (EC:2.4.1.223)
nr
ID XP_012064655.1
description PREDICTED: glycosyltransferase family protein 64 C3-like [Jatropha curcas]
swissprot
ID Q9C975
description Glycosyltransferase family protein 64 C3 OS=Arabidopsis thaliana GN=At1g80290 PE=2 SV=1
trembl
ID A0A067LH68
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05402 PE=4 SV=1
Gene Ontology
ID GO:0016021
description glycosyltransferase family protein 64 c3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44506: 36374-37190 , PASA_asmbl_44508: 37301-38343 , PASA_asmbl_44509: 38229-43350
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004767_050 0.0 - - PREDICTED: glycosyltransferase family protein 64 C3-like [Jatropha curcas]
2 Hb_048219_010 0.0639856935 - - coronatine-insensitive 1 [Hevea brasiliensis]
3 Hb_001818_070 0.0658077559 - - carbon catabolite repressor protein, putative [Ricinus communis]
4 Hb_000592_090 0.0711181389 - - PREDICTED: pentatricopeptide repeat-containing protein At3g18020 [Jatropha curcas]
5 Hb_003467_020 0.0749502436 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 13-like [Jatropha curcas]
6 Hb_011491_010 0.0784158018 - - Protein YME1, putative [Ricinus communis]
7 Hb_140506_010 0.0801285395 - - PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Jatropha curcas]
8 Hb_010172_090 0.0840689553 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
9 Hb_001838_060 0.0843609174 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1b(c38)-like isoform X3 [Jatropha curcas]
10 Hb_000175_220 0.0844341086 - - PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Jatropha curcas]
11 Hb_005675_040 0.0854410312 transcription factor TF Family: ERF unnamed protein product [Vitis vinifera]
12 Hb_000125_170 0.0860770851 transcription factor TF Family: mTERF hypothetical protein VITISV_028994 [Vitis vinifera]
13 Hb_012807_050 0.0863535783 desease resistance Gene Name: CDC48_N PREDICTED: cell division cycle protein 48 homolog [Jatropha curcas]
14 Hb_001005_190 0.0897594536 - - PREDICTED: UPF0496 protein At3g19330-like isoform X1 [Jatropha curcas]
15 Hb_004117_310 0.0899537798 - - PREDICTED: uncharacterized protein LOC105648043 [Jatropha curcas]
16 Hb_007416_180 0.091495543 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
17 Hb_000866_220 0.0916656711 - - PREDICTED: uncharacterized protein LOC105642989 [Jatropha curcas]
18 Hb_000229_020 0.0922941061 - - PREDICTED: pentatricopeptide repeat-containing protein At1g03540 [Jatropha curcas]
19 Hb_000173_490 0.0923985711 - - PREDICTED: F-box/LRR-repeat protein 4 isoform X2 [Jatropha curcas]
20 Hb_003211_020 0.0924811118 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_004767_050 Hb_004767_050 Hb_048219_010 Hb_048219_010 Hb_004767_050--Hb_048219_010 Hb_001818_070 Hb_001818_070 Hb_004767_050--Hb_001818_070 Hb_000592_090 Hb_000592_090 Hb_004767_050--Hb_000592_090 Hb_003467_020 Hb_003467_020 Hb_004767_050--Hb_003467_020 Hb_011491_010 Hb_011491_010 Hb_004767_050--Hb_011491_010 Hb_140506_010 Hb_140506_010 Hb_004767_050--Hb_140506_010 Hb_012564_030 Hb_012564_030 Hb_048219_010--Hb_012564_030 Hb_048219_010--Hb_001818_070 Hb_001856_230 Hb_001856_230 Hb_048219_010--Hb_001856_230 Hb_003544_110 Hb_003544_110 Hb_048219_010--Hb_003544_110 Hb_048219_010--Hb_011491_010 Hb_001818_070--Hb_140506_010 Hb_001838_060 Hb_001838_060 Hb_001818_070--Hb_001838_060 Hb_001818_070--Hb_011491_010 Hb_003211_020 Hb_003211_020 Hb_001818_070--Hb_003211_020 Hb_076693_020 Hb_076693_020 Hb_000592_090--Hb_076693_020 Hb_004602_040 Hb_004602_040 Hb_000592_090--Hb_004602_040 Hb_000322_150 Hb_000322_150 Hb_000592_090--Hb_000322_150 Hb_093084_060 Hb_093084_060 Hb_000592_090--Hb_093084_060 Hb_074969_010 Hb_074969_010 Hb_000592_090--Hb_074969_010 Hb_003455_020 Hb_003455_020 Hb_003467_020--Hb_003455_020 Hb_002188_110 Hb_002188_110 Hb_003467_020--Hb_002188_110 Hb_002890_090 Hb_002890_090 Hb_003467_020--Hb_002890_090 Hb_003467_020--Hb_001818_070 Hb_008500_010 Hb_008500_010 Hb_003467_020--Hb_008500_010 Hb_001005_190 Hb_001005_190 Hb_011491_010--Hb_001005_190 Hb_001828_130 Hb_001828_130 Hb_011491_010--Hb_001828_130 Hb_007163_120 Hb_007163_120 Hb_011491_010--Hb_007163_120 Hb_000243_250 Hb_000243_250 Hb_011491_010--Hb_000243_250 Hb_000092_020 Hb_000092_020 Hb_011491_010--Hb_000092_020 Hb_005541_010 Hb_005541_010 Hb_140506_010--Hb_005541_010 Hb_021576_110 Hb_021576_110 Hb_140506_010--Hb_021576_110 Hb_000049_260 Hb_000049_260 Hb_140506_010--Hb_000049_260 Hb_000125_170 Hb_000125_170 Hb_140506_010--Hb_000125_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.50388 14.6757 4.16536 6.6078 7.5376 12.7659
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.70692 10.8896 11.4354 8.45678 4.95648

CAGE analysis