Hb_003467_020

Information

Type -
Description -
Location Contig3467: 43062-51588
Sequence    

Annotation

kegg
ID cmo:103488817
description type I inositol 1,4,5-trisphosphate 5-phosphatase 12
nr
ID XP_012081928.1
description PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 13-like [Jatropha curcas]
swissprot
ID O80560
description Type I inositol 1,4,5-trisphosphate 5-phosphatase 12 OS=Arabidopsis thaliana GN=5PTASE12 PE=1 SV=1
trembl
ID A0A0A0KRV1
description Uncharacterized protein OS=Cucumis sativus GN=Csa_5G583340 PE=4 SV=1
Gene Ontology
ID GO:0004519
description type i inositol -trisphosphate 5-phosphatase 12-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36153: 49284-49462
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003467_020 0.0 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 13-like [Jatropha curcas]
2 Hb_004767_050 0.0749502436 - - PREDICTED: glycosyltransferase family protein 64 C3-like [Jatropha curcas]
3 Hb_003455_020 0.0845498728 - - PREDICTED: transportin-1 [Jatropha curcas]
4 Hb_002188_110 0.0873251242 desease resistance Gene Name: NB-ARC phosphoprotein phosphatase, putative [Ricinus communis]
5 Hb_002890_090 0.0886596612 - - Auxin response factor 1 [Glycine soja]
6 Hb_001818_070 0.0886657561 - - carbon catabolite repressor protein, putative [Ricinus communis]
7 Hb_008500_010 0.0915843415 - - PREDICTED: pentatricopeptide repeat-containing protein At2g17210 [Jatropha curcas]
8 Hb_140506_010 0.0928897474 - - PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Jatropha curcas]
9 Hb_048219_010 0.0933973154 - - coronatine-insensitive 1 [Hevea brasiliensis]
10 Hb_000928_300 0.0941221271 - - PREDICTED: pentatricopeptide repeat-containing protein At3g03580 [Jatropha curcas]
11 Hb_001584_150 0.0954496867 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Jatropha curcas]
12 Hb_004117_310 0.0981215568 - - PREDICTED: uncharacterized protein LOC105648043 [Jatropha curcas]
13 Hb_000080_150 0.0994599768 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X2 [Jatropha curcas]
14 Hb_006316_040 0.1001398082 - - PREDICTED: pentatricopeptide repeat-containing protein At5g16860 [Jatropha curcas]
15 Hb_008775_040 0.1004462754 - - Pentatricopeptide repeat (PPR) superfamily protein, putative [Theobroma cacao]
16 Hb_183963_030 0.1008053094 - - DNA binding protein, putative [Ricinus communis]
17 Hb_000140_230 0.101076363 - - PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Jatropha curcas]
18 Hb_093084_060 0.101686359 - - PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g64310 [Jatropha curcas]
19 Hb_009851_070 0.102467994 - - PREDICTED: cyclin-dependent kinase E-1 [Jatropha curcas]
20 Hb_001967_030 0.1030202077 - - PREDICTED: uncharacterized protein LOC105633557 [Jatropha curcas]

Gene co-expression network

sample Hb_003467_020 Hb_003467_020 Hb_004767_050 Hb_004767_050 Hb_003467_020--Hb_004767_050 Hb_003455_020 Hb_003455_020 Hb_003467_020--Hb_003455_020 Hb_002188_110 Hb_002188_110 Hb_003467_020--Hb_002188_110 Hb_002890_090 Hb_002890_090 Hb_003467_020--Hb_002890_090 Hb_001818_070 Hb_001818_070 Hb_003467_020--Hb_001818_070 Hb_008500_010 Hb_008500_010 Hb_003467_020--Hb_008500_010 Hb_048219_010 Hb_048219_010 Hb_004767_050--Hb_048219_010 Hb_004767_050--Hb_001818_070 Hb_000592_090 Hb_000592_090 Hb_004767_050--Hb_000592_090 Hb_011491_010 Hb_011491_010 Hb_004767_050--Hb_011491_010 Hb_140506_010 Hb_140506_010 Hb_004767_050--Hb_140506_010 Hb_003455_020--Hb_002890_090 Hb_000878_180 Hb_000878_180 Hb_003455_020--Hb_000878_180 Hb_004109_030 Hb_004109_030 Hb_003455_020--Hb_004109_030 Hb_003640_040 Hb_003640_040 Hb_003455_020--Hb_003640_040 Hb_003082_010 Hb_003082_010 Hb_003455_020--Hb_003082_010 Hb_183963_030 Hb_183963_030 Hb_002188_110--Hb_183963_030 Hb_000025_360 Hb_000025_360 Hb_002188_110--Hb_000025_360 Hb_000959_040 Hb_000959_040 Hb_002188_110--Hb_000959_040 Hb_007676_100 Hb_007676_100 Hb_002188_110--Hb_007676_100 Hb_000441_070 Hb_000441_070 Hb_002188_110--Hb_000441_070 Hb_001247_070 Hb_001247_070 Hb_002188_110--Hb_001247_070 Hb_000941_130 Hb_000941_130 Hb_002890_090--Hb_000941_130 Hb_002636_180 Hb_002636_180 Hb_002890_090--Hb_002636_180 Hb_002043_140 Hb_002043_140 Hb_002890_090--Hb_002043_140 Hb_002890_090--Hb_004109_030 Hb_000976_210 Hb_000976_210 Hb_002890_090--Hb_000976_210 Hb_001818_070--Hb_140506_010 Hb_001838_060 Hb_001838_060 Hb_001818_070--Hb_001838_060 Hb_001818_070--Hb_011491_010 Hb_003211_020 Hb_003211_020 Hb_001818_070--Hb_003211_020 Hb_001818_070--Hb_048219_010 Hb_006316_040 Hb_006316_040 Hb_008500_010--Hb_006316_040 Hb_001584_150 Hb_001584_150 Hb_008500_010--Hb_001584_150 Hb_012656_030 Hb_012656_030 Hb_008500_010--Hb_012656_030 Hb_004724_060 Hb_004724_060 Hb_008500_010--Hb_004724_060 Hb_015807_070 Hb_015807_070 Hb_008500_010--Hb_015807_070 Hb_002311_040 Hb_002311_040 Hb_008500_010--Hb_002311_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.24064 2.09288 0.501144 0.979496 1.57928 2.05844
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.548217 1.2655 1.80181 1.16254 0.676886

CAGE analysis