Hb_000167_020

Information

Type -
Description -
Location Contig167: 10558-11150
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000167_020 0.0 - - -
2 Hb_011360_030 0.2438424588 - - zinc finger protein, putative [Ricinus communis]
3 Hb_007218_140 0.272037056 - - hypothetical protein JCGZ_24847 [Jatropha curcas]
4 Hb_008864_070 0.2863627372 - - PREDICTED: uncharacterized protein LOC105803851 [Gossypium raimondii]
5 Hb_015175_010 0.2993080537 - - hypothetical protein JCGZ_17977 [Jatropha curcas]
6 Hb_006096_010 0.2996788496 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002063_030 0.3136337562 - - -
8 Hb_000072_330 0.3158436448 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001902_150 0.3220702302 - - PREDICTED: cytokinin hydroxylase-like [Jatropha curcas]
10 Hb_000186_210 0.3328104613 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
11 Hb_021888_090 0.3356888998 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 isoform X1 [Malus domestica]
12 Hb_008695_030 0.3395956607 - - hypothetical protein JCGZ_12043 [Jatropha curcas]
13 Hb_002316_040 0.3402315632 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
14 Hb_020400_040 0.3456908394 - - PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Jatropha curcas]
15 Hb_001059_020 0.3461804898 - - PREDICTED: FBD-associated F-box protein At4g10400-like [Malus domestica]
16 Hb_001189_060 0.3480147611 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
17 Hb_006907_120 0.3537355549 - - PREDICTED: uncharacterized protein LOC103327233 [Prunus mume]
18 Hb_001341_110 0.3542125619 - - PREDICTED: vicilin-like antimicrobial peptides 2-2 [Jatropha curcas]
19 Hb_000645_100 0.3608576149 - - enzyme inhibitor, putative [Ricinus communis]
20 Hb_000574_120 0.3633553763 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000167_020 Hb_000167_020 Hb_011360_030 Hb_011360_030 Hb_000167_020--Hb_011360_030 Hb_007218_140 Hb_007218_140 Hb_000167_020--Hb_007218_140 Hb_008864_070 Hb_008864_070 Hb_000167_020--Hb_008864_070 Hb_015175_010 Hb_015175_010 Hb_000167_020--Hb_015175_010 Hb_006096_010 Hb_006096_010 Hb_000167_020--Hb_006096_010 Hb_002063_030 Hb_002063_030 Hb_000167_020--Hb_002063_030 Hb_088084_010 Hb_088084_010 Hb_011360_030--Hb_088084_010 Hb_001277_140 Hb_001277_140 Hb_011360_030--Hb_001277_140 Hb_002641_100 Hb_002641_100 Hb_011360_030--Hb_002641_100 Hb_022137_040 Hb_022137_040 Hb_011360_030--Hb_022137_040 Hb_131956_010 Hb_131956_010 Hb_011360_030--Hb_131956_010 Hb_000072_330 Hb_000072_330 Hb_007218_140--Hb_000072_330 Hb_001902_150 Hb_001902_150 Hb_007218_140--Hb_001902_150 Hb_065500_040 Hb_065500_040 Hb_007218_140--Hb_065500_040 Hb_000574_120 Hb_000574_120 Hb_007218_140--Hb_000574_120 Hb_000275_070 Hb_000275_070 Hb_007218_140--Hb_000275_070 Hb_000975_330 Hb_000975_330 Hb_007218_140--Hb_000975_330 Hb_008864_070--Hb_006096_010 Hb_005701_030 Hb_005701_030 Hb_008864_070--Hb_005701_030 Hb_001863_440 Hb_001863_440 Hb_008864_070--Hb_001863_440 Hb_008864_070--Hb_001902_150 Hb_000186_210 Hb_000186_210 Hb_008864_070--Hb_000186_210 Hb_001277_200 Hb_001277_200 Hb_015175_010--Hb_001277_200 Hb_000019_140 Hb_000019_140 Hb_015175_010--Hb_000019_140 Hb_156850_080 Hb_156850_080 Hb_015175_010--Hb_156850_080 Hb_005276_170 Hb_005276_170 Hb_015175_010--Hb_005276_170 Hb_001268_060 Hb_001268_060 Hb_015175_010--Hb_001268_060 Hb_004787_100 Hb_004787_100 Hb_015175_010--Hb_004787_100 Hb_020400_040 Hb_020400_040 Hb_006096_010--Hb_020400_040 Hb_002272_010 Hb_002272_010 Hb_006096_010--Hb_002272_010 Hb_002110_240 Hb_002110_240 Hb_006096_010--Hb_002110_240 Hb_002205_010 Hb_002205_010 Hb_006096_010--Hb_002205_010 Hb_009233_030 Hb_009233_030 Hb_006096_010--Hb_009233_030 Hb_002063_030--Hb_001902_150 Hb_001189_060 Hb_001189_060 Hb_002063_030--Hb_001189_060 Hb_002063_030--Hb_007218_140 Hb_008695_030 Hb_008695_030 Hb_002063_030--Hb_008695_030 Hb_017647_020 Hb_017647_020 Hb_002063_030--Hb_017647_020 Hb_002063_030--Hb_000275_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0588246 0.467505 0.0453196 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.137834 0.108281 0 0 0

CAGE analysis